RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 HERC4Q5GLZ8 1057 aaPredicted RBP22.16■■□□□ 1.14
SSRP1-204ENST00000529002 CELF3Q5SZQ8 465 aaKnown RBP22.16■■□□□ 1.14
SSRP1-204ENST00000529002 ZNF589Q86UQ0 364 aaPredicted RBP22.16■■□□□ 1.14
SSRP1-204ENST00000529002 IL31RAQ8NI17 732 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 COL4A6Q14031 1691 aa22.16■■□□□ 1.14
SSRP1-204ENST00000529002 SMIM10L2AP0DMW4 78 aa22.15■■□□□ 1.14
SSRP1-204ENST00000529002 SMIM10L2BP0DMW5 78 aa22.15■■□□□ 1.14
SSRP1-204ENST00000529002 HSPD1P10809 573 aaKnown RBP22.15■■□□□ 1.14
SSRP1-204ENST00000529002 MFSD6Q6ZSS7 791 aa22.15■■□□□ 1.14
SSRP1-204ENST00000529002 MCF2L2Q86YR7 1114 aa22.15■■□□□ 1.14
SSRP1-204ENST00000529002 RNPEPQ9H4A4 650 aa22.15■■□□□ 1.14
SSRP1-204ENST00000529002 HELLSQ9NRZ9 838 aa22.15■■□□□ 1.14
SSRP1-204ENST00000529002 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
SSRP1-204ENST00000529002 SALL3Q9BXA9 1300 aa22.14■■□□□ 1.14
SSRP1-204ENST00000529002 DHX16O60231 1041 aaKnown RBP22.14■■□□□ 1.13
SSRP1-204ENST00000529002 UBA1P22314 1058 aaKnown RBP22.14■■□□□ 1.13
SSRP1-204ENST00000529002 FIBCD1Q8N539 461 aa22.14■■□□□ 1.13
SSRP1-204ENST00000529002 PNMA1Q8ND90 353 aa22.14■■□□□ 1.13
SSRP1-204ENST00000529002 PDCD2LQ9BRP1 358 aa22.14■■□□□ 1.13
SSRP1-204ENST00000529002 JMJD4Q9H9V9 463 aa22.14■■□□□ 1.13
SSRP1-204ENST00000529002 MRPL11Q9Y3B7 192 aaKnown RBP22.14■■□□□ 1.13
SSRP1-204ENST00000529002 TTC3P53804 2025 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 STXBP3O00186 592 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 HOXC8P31273 242 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 EDAQ92838 391 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 IL17RAQ96F46 866 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 TELO2Q9Y4R8 837 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 PCDHB15Q9Y5E8 787 aa22.13■■□□□ 1.13
SSRP1-204ENST00000529002 H3BRB1 525 aa22.12■■□□□ 1.13
SSRP1-204ENST00000529002 LGALS2P05162 132 aa22.12■■□□□ 1.13
SSRP1-204ENST00000529002 HOXA13P31271 388 aaPredicted RBP22.12■■□□□ 1.13
SSRP1-204ENST00000529002 BMPR1AP36894 532 aa22.12■■□□□ 1.13
SSRP1-204ENST00000529002 SMAD4Q13485 552 aaKnown RBP22.12■■□□□ 1.13
SSRP1-204ENST00000529002 TUT1Q9H6E5 874 aaKnown RBP22.12■■□□□ 1.13
SSRP1-204ENST00000529002 SETD4Q9NVD3 440 aa22.12■■□□□ 1.13
SSRP1-204ENST00000529002 FAM86C1Q9NVL1 165 aa22.12■■□□□ 1.13
SSRP1-204ENST00000529002 LOXHD1Q8IVV2 1947 aa22.12■■□□□ 1.13
SSRP1-204ENST00000529002 TMEM221A6NGB7 291 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 C5orf67F2Z3F1 127 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 M0R296 226 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 HSD17B4P51659 736 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 TCF15Q12870 199 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 NMIQ13287 307 aaPredicted RBP22.11■■□□□ 1.13
SSRP1-204ENST00000529002 MCMDC2Q4G0Z9 681 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 PBXIP1Q96AQ6 731 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 EVI5LQ96CN4 794 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 ALG13Q9NP73 1137 aaKnown RBP22.11■■□□□ 1.13
SSRP1-204ENST00000529002 CD207Q9UJ71 328 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 USP34Q70CQ2 3546 aa22.11■■□□□ 1.13
SSRP1-204ENST00000529002 NCK2O43639 380 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 PPP1R11O60927 126 aaPredicted RBP22.1■■□□□ 1.13
SSRP1-204ENST00000529002 CAMK1Q14012 370 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 PGM5Q15124 567 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 TRIM67Q6ZTA4 783 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 DGKHQ86XP1 1220 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 TRIM50Q86XT4 487 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 POP1Q99575 1024 aaKnown RBP22.1■■□□□ 1.13
SSRP1-204ENST00000529002 MAF1Q9H063 256 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 MLXIPQ9HAP2 919 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 LAMA4Q16363 1823 aa22.1■■□□□ 1.13
SSRP1-204ENST00000529002 CACNA1HO95180 2353 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 KDM4AO75164 1064 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 ADAM15Q13444 863 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 ADGRD2Q7Z7M1 963 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 VSIG10LQ86VR7 867 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 STAG2Q8N3U4 1231 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 C11orf84Q9BUA3 381 aaPredicted RBP22.09■■□□□ 1.13
SSRP1-204ENST00000529002 KAT14Q9H8E8 782 aa22.09■■□□□ 1.13
SSRP1-204ENST00000529002 RC3H2Q9HBD1 1191 aaKnown RBP22.09■■□□□ 1.13
SSRP1-204ENST00000529002 ZMYM6O95789 1325 aa22.08■■□□□ 1.13
SSRP1-204ENST00000529002 RB1P06400 928 aa22.08■■□□□ 1.13
SSRP1-204ENST00000529002 PTPN5P54829 565 aa22.08■■□□□ 1.13
SSRP1-204ENST00000529002 BMP8AQ7Z5Y6 402 aa22.08■■□□□ 1.13
SSRP1-204ENST00000529002 ESR2Q92731 530 aa22.08■■□□□ 1.13
SSRP1-204ENST00000529002 LMAN2LQ9H0V9 348 aa22.08■■□□□ 1.13
SSRP1-204ENST00000529002 ADGRA3Q8IWK6 1321 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 PLXNA4Q9HCM2 1894 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 CHRNA1P02708 482 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 PARP1P09874 1014 aaKnown RBP22.07■■□□□ 1.12
SSRP1-204ENST00000529002 GHRP10912 638 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 DNAJB1P25685 340 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 ASPRV1Q53RT3 343 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 STOX1Q6ZVD7 989 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 MSLNLQ96KJ4 702 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 CLEC1BQ9P126 229 aa22.07■■□□□ 1.12
SSRP1-204ENST00000529002 CCDC171Q6TFL3 1326 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 PTPRZ1P23471 2315 aaPredicted RBP22.06■■□□□ 1.12
SSRP1-204ENST00000529002 B4E1Z4 1266 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 ST18O60284 1047 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 NDUFV1P49821 464 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 FAM26DQ5JW98 314 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 UTP14CQ5TAP6 766 aaKnown RBP22.06■■□□□ 1.12
SSRP1-204ENST00000529002 KCNV1Q6PIU1 500 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 FCHSD1Q86WN1 690 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 ENAHQ8N8S7 591 aaPredicted RBP22.06■■□□□ 1.12
SSRP1-204ENST00000529002 APBB2Q92870 758 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 AMNQ9BXJ7 453 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 PLXNA3P51805 1871 aa22.06■■□□□ 1.12
SSRP1-204ENST00000529002 CFAP54Q96N23 3096 aa22.05■■□□□ 1.12
SSRP1-204ENST00000529002 CAND2O75155 1236 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms