RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 SAMM50Q9Y512 469 aa8.94□□□□□ -0.98
SSBP3-211ENST00000528787 PPME1Q9Y570 386 aa8.94□□□□□ -0.98
SSBP3-211ENST00000528787 KDM3AQ9Y4C1 1321 aa8.94□□□□□ -0.98
SSBP3-211ENST00000528787 CEP350Q5VT06 3117 aa8.94□□□□□ -0.98
SSBP3-211ENST00000528787 MOXD2PA6NHM9 499 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 KIF28PB7ZC32 967 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 KBTBD13C9JR72 458 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 FAM86B1E9PN63 330 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 SPTLC2O15270 562 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 IGHA2P01877 340 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 FAM86B2P0C5J1 330 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 ZNF865P0CJ78 1059 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-211ENST00000528787 ELNP15502 786 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 ITGB5P18084 799 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 CYP2C19P33261 490 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 NASPP49321 788 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-211ENST00000528787 NKX3-2P78367 333 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 PPP2R5CQ13362 524 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 SLC39A14Q15043 492 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 ZNF174Q15697 407 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
SSBP3-211ENST00000528787 KRT79Q5XKE5 535 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 TAPT1Q6NXT6 567 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 EEPD1Q7L9B9 569 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 TLK2Q86UE8 772 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
SSBP3-211ENST00000528787 OR6J1Q8NGC5 347 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 RASSF8Q8NHQ8 419 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 SEPT1Q8WYJ6 367 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 SLC5A5Q92911 643 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 CALML4Q96GE6 196 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 CDK5RAP3Q96JB5 506 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 PGBD1Q96JS3 809 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 FGD4Q96M96 766 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.93□□□□□ -0.98
SSBP3-211ENST00000528787 RNF208Q9H0X6 261 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 TTC12Q9H892 705 aaPredicted RBP8.93□□□□□ -0.98
SSBP3-211ENST00000528787 KCNMB3Q9NPA1 279 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 PCDHA10Q9Y5I2 948 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 ELP1O95163 1332 aa8.93□□□□□ -0.98
SSBP3-211ENST00000528787 KAT6AQ92794 2004 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 TCHHQ07283 1943 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 ZSWIM8A7E2V4 1837 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 ASTN1O14525 1302 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 MSH4O15457 936 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 CUTAO60888 179 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 ECM2O94769 699 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 TDP2O95551 362 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 GGPS1O95749 300 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 GNAT1P11488 350 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 TAL1P17542 331 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 CST5P28325 142 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 UBA7P41226 1012 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 TXKP42681 527 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 ME1P48163 572 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 GJA9P57773 515 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 CCL14Q16627 93 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 CCDC62Q6P9F0 684 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 OTUD6AQ7L8S5 288 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 MIER3Q7Z3K6 550 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 ETNPPLQ8TBG4 499 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 SHISA4Q96DD7 197 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 CCDC43Q96MW1 224 aaKnown RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 SPATA33Q96N06 139 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 MTMR9Q96QG7 549 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 JPH2Q9BR39 696 aaPredicted RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 LRRC27Q9C0I9 530 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 SMARCAD1Q9H4L7 1026 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 TUFT1Q9NNX1 390 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 XPNPEP3Q9NQH7 507 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 LRWD1Q9UFC0 647 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 USP25Q9UHP3 1055 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 KCNG1Q9UIX4 513 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 HOOK1Q9UJC3 728 aaKnown RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 PCDHB6Q9Y5E3 794 aa8.92□□□□□ -0.98
SSBP3-211ENST00000528787 SRPRBQ9Y5M8 271 aaKnown RBP8.92□□□□□ -0.98
SSBP3-211ENST00000528787 PCNTO95613 3336 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 A6NJR5 290 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 BACH1O14867 736 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 PSMD10O75832 226 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 FARP2O94887 1054 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 P4HBP07237 508 aaKnown RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 GJB1P08034 283 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 XRCC6P12956 609 aaKnown RBP eCLIP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 KCNA2P16389 499 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 UBA1P22314 1058 aaKnown RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 ADCYAP1R1P41586 468 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 TOB1P50616 345 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 EPHA7Q15375 998 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 FSCN1Q16658 493 aaKnown RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 CLEC17AQ6ZS10 378 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 FAM43BQ6ZT52 329 aaPredicted RBP8.91□□□□□ -0.98
SSBP3-211ENST00000528787 PLPPR4Q7Z2D5 763 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 POTEDQ86YR6 584 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 LINC00301Q8NCQ3 95 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 IL31RAQ8NI17 732 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 ZNF333Q96JL9 665 aa8.91□□□□□ -0.98
SSBP3-211ENST00000528787 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms