RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SHMT1P34896 483 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 GTF2F1P35269 517 aaKnown RBP eCLIP13.16□□□□□ -0.3
USF1-208ENST00000528768 HMGCS2P54868 508 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 PAK1Q13153 545 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 CEP135Q66GS9 1140 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 TMEM179Q6ZVK1 233 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 CABP7Q86V35 215 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 CCAR2Q8N163 923 aaKnown RBP13.16□□□□□ -0.3
USF1-208ENST00000528768 NOC3LQ8WTT2 800 aaKnown RBP13.16□□□□□ -0.3
USF1-208ENST00000528768 MYLIPQ8WY64 445 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 CUL5Q93034 780 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 MKL1Q969V6 931 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 APBA2Q99767 749 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 SENP6Q9GZR1 1112 aaPredicted RBP13.16□□□□□ -0.3
USF1-208ENST00000528768 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 HSD3B7Q9H2F3 369 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 RIC8AQ9NPQ8 531 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 EYSQ5T1H1 3165 aa13.16□□□□□ -0.3
USF1-208ENST00000528768 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
USF1-208ENST00000528768 WNT7AO00755 349 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 ZBTB5O15062 677 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 SLC26A4O43511 780 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 MARCH6O60337 910 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 CUL4BQ13620 913 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 IL17AQ16552 155 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 MFSD14CQ5VZR4 134 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 KLHL10Q6JEL2 608 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 KIF18AQ8NI77 898 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 TBCKQ8TEA7 893 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 USP6NLQ92738 828 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 CDK5RAP3Q96JB5 506 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
USF1-208ENST00000528768 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.15□□□□□ -0.3
USF1-208ENST00000528768 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.38e-7■■■□□ 17.7
USF1-208ENST00000528768 PLXNB2O15031 1838 aa13.15□□□□□ -0.3
USF1-208ENST00000528768 A0A1B0GTH6 734 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 DNM1LO00429 736 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 PSMA7O14818 248 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 CCND3P30281 292 aaPredicted RBP13.14□□□□□ -0.31
USF1-208ENST00000528768 TRIM14Q14142 442 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 PDIA5Q14554 519 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 KARSQ15046 597 aaKnown RBP13.14□□□□□ -0.31
USF1-208ENST00000528768 SHHQ15465 462 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 CALCRLQ16602 461 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 ARMCX5Q6P1M9 558 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 ADGRF4Q8IZF3 695 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 LPAR1Q92633 364 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 MAGEC2Q9UBF1 373 aaPredicted RBP13.14□□□□□ -0.31
USF1-208ENST00000528768 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 CTNND2Q9UQB3 1225 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
USF1-208ENST00000528768 DNAH12Q6ZR08 3092 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 C19orf81C9J6K1 198 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 RRP9O43818 475 aaKnown RBP13.13□□□□□ -0.31
USF1-208ENST00000528768 CAP2P40123 477 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 SLC1A4P43007 532 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 FXR2P51116 673 aaKnown RBP eCLIP13.13□□□□□ -0.31
USF1-208ENST00000528768 HERVK_113P62684 666 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 NR1I3Q14994 352 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 ABCB5Q2M3G0 1257 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 MORN1Q5T089 497 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 CDKAL1Q5VV42 579 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 SLFN13Q68D06 897 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 PLEKHH3Q7Z736 793 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 FAM114A1Q8IWE2 563 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
USF1-208ENST00000528768 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 NAA15Q9BXJ9 866 aaKnown RBP13.13□□□□□ -0.31
USF1-208ENST00000528768 BLZF1Q9H2G9 400 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 TTYH1Q9H313 450 aaPredicted RBP13.13□□□□□ -0.31
USF1-208ENST00000528768 JMJD4Q9H9V9 463 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 EXOC1Q9NV70 894 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
USF1-208ENST00000528768 MYH8P13535 1937 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
USF1-208ENST00000528768 AKR1B15C9JRZ8 316 aaPredicted RBP13.12□□□□□ -0.31
USF1-208ENST00000528768 STX10O60499 249 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 BACE1P56817 501 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 STX17P56962 302 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 RTP1P59025 263 aa13.12□□□□□ -0.31
USF1-208ENST00000528768 CCNA1P78396 465 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms