RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 TLR2O60603 784 aa20.83■□□□□ 0.92
TM9SF1-206ENST00000528669 POLR2FP61218 127 aaKnown RBP20.83■□□□□ 0.92
TM9SF1-206ENST00000528669 AFAP1L1Q8TED9 768 aa20.83■□□□□ 0.92
TM9SF1-206ENST00000528669 BMP2KQ9NSY1 1161 aaPredicted RBP20.83■□□□□ 0.92
TM9SF1-206ENST00000528669 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 PJA2O43164 708 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 PLA2G4BP0C869 781 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 PRLRP16471 622 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 TCP1P17987 556 aaKnown RBP20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 STAT3P40763 770 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 ENOX2Q16206 610 aaKnown RBP20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 FAM83BQ5T0W9 1011 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 GOLGA6L1Q8N7Z2 621 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 AENQ8WTP8 325 aaKnown RBP20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 ZHX3Q9H4I2 956 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 EP400Q96L91 3159 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 DNA2P51530 1060 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 ARID5AQ03989 594 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 DDR1Q08345 913 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 HERC4Q5GLZ8 1057 aaPredicted RBP20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 KLHDC7AQ5VTJ3 777 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 SFMBT2Q5VUG0 894 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 SND1Q7KZF4 910 aaKnown RBP eCLIP20.82■□□□□ 0.922e-7■■■■■ 28.3
TM9SF1-206ENST00000528669 GPBP1Q86WP2 473 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 MS4A14Q96JA4 679 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 TLR10Q9BXR5 811 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 TRIM34Q9BYJ4 488 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 CEP72Q9P209 647 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 FAM184BQ9ULE4 1060 aa20.82■□□□□ 0.92
TM9SF1-206ENST00000528669 DOK7Q18PE1 504 aa20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 SHROOM1Q2M3G4 852 aaPredicted RBP20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 SLC9C1Q4G0N8 1177 aa20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 ZNF572Q7Z3I7 529 aaPredicted RBP20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 SWAP70Q9UH65 585 aa20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 PCDHA2Q9Y5H9 948 aa20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 ADAMTSL1Q8N6G6 1762 aa20.81■□□□□ 0.92
TM9SF1-206ENST00000528669 SSU72P8A0A1W2PR75 194 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 ADRA2BP18089 450 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 HOXA10P31260 410 aaPredicted RBP20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 GPATCH4Q5T3I0 446 aaKnown RBP20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 CCDC65Q8IXS2 484 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 NOX5Q96PH1 765 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 NT5C3AQ9H0P0 336 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 ATF5Q9Y2D1 282 aaPredicted RBP20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 FAM196BA6NMK8 535 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 PPEF1O14829 653 aaPredicted RBP20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 GCFC2P16383 781 aaKnown RBP20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 NFIAQ12857 509 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 SEPT2Q15019 361 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 CDC42EP5Q6NZY7 148 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 LRRC31Q6UY01 552 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 SCFD1Q8WVM8 642 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 EDEM3Q9BZQ6 932 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 KDM3AQ9Y4C1 1321 aa20.8■□□□□ 0.92
TM9SF1-206ENST00000528669 TOM1O60784 492 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 QRICH1Q2TAL8 776 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 HYIQ5T013 277 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 ZFPM1Q8IX07 1006 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 PLEKHA4Q9H4M7 779 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 GOLGA6BA6NDN3 693 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 MED24O75448 989 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 SERPING1P05155 500 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 KRT18P05783 430 aaKnown RBP20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 PAFAH1B1P43034 410 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 RAPGEF1Q13905 1077 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 HAUS3Q68CZ6 603 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 CRAMP1Q96RY5 1269 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 COA1Q9GZY4 146 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 RBM12Q9NTZ6 932 aaKnown RBP20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 THSD7AQ9UPZ6 1657 aa20.79■□□□□ 0.92
TM9SF1-206ENST00000528669 CYP11B2P19099 503 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 ITIH3Q06033 890 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 FOXR2Q6PJQ5 311 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 TRIM59Q8IWR1 403 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 TBC1D5Q92609 795 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 CEP63Q96MT8 703 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 KCTD10Q9H3F6 313 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 EMILIN3Q9NT22 766 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 PCDHA1Q9Y5I3 950 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 POTEFA5A3E0 1075 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 IVLP07476 585 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 POTEIP0CG38 1075 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 ADAM9Q13443 819 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 POTEGQ6S5H5 508 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 POTEEQ6S8J3 1075 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 ANO3Q9BYT9 981 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 UBR3Q6ZT12 1888 aa20.78■□□□□ 0.92
TM9SF1-206ENST00000528669 RBAK-RBAKDNI3L0D1 243 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 RPS6KA5O75582 802 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 PALMO75781 387 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 FTCDO95954 541 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 HLA-DOAP06340 250 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 CACNB3P54284 484 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 SNAP25P60880 206 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 FAM133AQ8N9E0 248 aa20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 ZC3H12CQ9C0D7 883 aaKnown RBP20.77■□□□□ 0.92
TM9SF1-206ENST00000528669 ATP6V0A2Q9Y487 856 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms