RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 TTLL7Q6ZT98 887 aa11.36□□□□□ -0.59
CTNND1-217ENST00000527599 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
CTNND1-217ENST00000527599 FRMD5Q7Z6J6 570 aa11.36□□□□□ -0.59
CTNND1-217ENST00000527599 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
CTNND1-217ENST00000527599 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
CTNND1-217ENST00000527599 KRIT1O00522 736 aa11.35□□□□□ -0.59
CTNND1-217ENST00000527599 FOXD2O60548 495 aaPredicted RBP11.35□□□□□ -0.59
CTNND1-217ENST00000527599 LTFP02788 710 aa11.35□□□□□ -0.59
CTNND1-217ENST00000527599 DNAJC7Q99615 494 aa11.35□□□□□ -0.59
CTNND1-217ENST00000527599 NGRNQ9NPE2 291 aaKnown RBP11.35□□□□□ -0.59
CTNND1-217ENST00000527599 PRICKLE3O43900 615 aaPredicted RBP11.34□□□□□ -0.59
CTNND1-217ENST00000527599 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
CTNND1-217ENST00000527599 GRIN1Q05586 938 aa11.34□□□□□ -0.59
CTNND1-217ENST00000527599 PROSER1Q86XN7 944 aa11.34□□□□□ -0.59
CTNND1-217ENST00000527599 UHMK1Q8TAS1 419 aaKnown RBP11.34□□□□□ -0.59
CTNND1-217ENST00000527599 ADAMTS17Q8TE56 1095 aa11.34□□□□□ -0.59
CTNND1-217ENST00000527599 DUSP10Q9Y6W6 482 aa11.34□□□□□ -0.59
CTNND1-217ENST00000527599 PMFBP1Q8TBY8 1022 aa11.33□□□□□ -0.6
CTNND1-217ENST00000527599 PTPRN2Q92932 1015 aa11.33□□□□□ -0.6
CTNND1-217ENST00000527599 KISS1RQ969F8 398 aaPredicted RBP11.33□□□□□ -0.6
CTNND1-217ENST00000527599 ZSWIM3Q96MP5 696 aa11.33□□□□□ -0.6
CTNND1-217ENST00000527599 DHRS4Q9BTZ2 278 aa11.33□□□□□ -0.6
CTNND1-217ENST00000527599 TCRBV5S4A2TA0A5A2 114 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 MAFKO60675 156 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 GNAT1P11488 350 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 TUSC3Q13454 348 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 TTLL11Q8NHH1 800 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 TEPSINQ96N21 525 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 HSPBP1Q9NZL4 362 aa11.32□□□□□ -0.6
CTNND1-217ENST00000527599 MRPS23Q9Y3D9 190 aaKnown RBP11.32□□□□□ -0.6
CTNND1-217ENST00000527599 B8ZZF3 427 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 FAM47E-STBD1D6RA91 191 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 SF3A1Q15459 793 aaKnown RBP11.31□□□□□ -0.6
CTNND1-217ENST00000527599 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 MAMDC2Q7Z304 686 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-217ENST00000527599 SH3RF2Q8TEC5 729 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 MKL1Q969V6 931 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
CTNND1-217ENST00000527599 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 NCANO14594 1321 aa11.31□□□□□ -0.6
CTNND1-217ENST00000527599 DDX3XO00571 662 aaKnown RBP eCLIP11.3□□□□□ -0.6
CTNND1-217ENST00000527599 PRRG2O14669 202 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 TMC5Q6UXY8 1006 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 DPH6Q7L8W6 267 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 TRIM48Q8IWZ4 208 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 DNAJC2Q99543 621 aaKnown RBP11.3□□□□□ -0.6
CTNND1-217ENST00000527599 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 KRTAP4-9Q9BYQ8 210 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 LNPKQ9C0E8 428 aa11.3□□□□□ -0.6
CTNND1-217ENST00000527599 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-217ENST00000527599 FERMT3Q86UX7 667 aa11.29□□□□□ -0.6
CTNND1-217ENST00000527599 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
CTNND1-217ENST00000527599 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
CTNND1-217ENST00000527599 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
CTNND1-217ENST00000527599 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
CTNND1-217ENST00000527599 DSEQ9UL01 958 aa11.29□□□□□ -0.6
CTNND1-217ENST00000527599 AQP7O14520 342 aa11.28□□□□□ -0.6
CTNND1-217ENST00000527599 BUD31P41223 144 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-217ENST00000527599 MLLT6P55198 1093 aaPredicted RBP11.28□□□□□ -0.6
CTNND1-217ENST00000527599 PAK1Q13153 545 aa11.28□□□□□ -0.6
CTNND1-217ENST00000527599 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
CTNND1-217ENST00000527599 MCTP2Q6DN12 878 aa11.28□□□□□ -0.6
CTNND1-217ENST00000527599 ARVCFO00192 962 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 WNT9AO14904 365 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 ZNF28P17035 718 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 EPHA5P54756 1037 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 GJA9P57773 515 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 RGL3Q3MIN7 710 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.61
CTNND1-217ENST00000527599 TXNDC5Q8NBS9 432 aaKnown RBP11.27□□□□□ -0.61
CTNND1-217ENST00000527599 SREK1Q8WXA9 508 aaKnown RBP11.27□□□□□ -0.61
CTNND1-217ENST00000527599 IPO9Q96P70 1041 aaKnown RBP11.27□□□□□ -0.61
CTNND1-217ENST00000527599 CD244Q9BZW8 370 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 PCDHA9Q9Y5H5 950 aa11.27□□□□□ -0.61
CTNND1-217ENST00000527599 ACOT7O00154 380 aa11.26□□□□□ -0.61
CTNND1-217ENST00000527599 FAHP16930 419 aa11.26□□□□□ -0.61
CTNND1-217ENST00000527599 SYN1P17600 705 aa11.26□□□□□ -0.61
CTNND1-217ENST00000527599 GABREP78334 506 aa11.26□□□□□ -0.61
CTNND1-217ENST00000527599 SKOR2Q2VWA4 1001 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-217ENST00000527599 PAN2Q504Q3 1202 aaKnown RBP11.26□□□□□ -0.61
CTNND1-217ENST00000527599 PHF19Q5T6S3 580 aa11.26□□□□□ -0.61
CTNND1-217ENST00000527599 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.26□□□□□ -0.61
CTNND1-217ENST00000527599 LILRB2Q8N423 598 aa11.26□□□□□ -0.61
CTNND1-217ENST00000527599 GUCY1A3Q02108 690 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 FAM26FQ5R3K3 315 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 KCTD1Q719H9 257 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 ZCCHC14Q8WYQ9 949 aaKnown RBP11.25□□□□□ -0.61
CTNND1-217ENST00000527599 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 TMEM209Q96SK2 561 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 CBLCQ9ULV8 474 aa11.25□□□□□ -0.61
CTNND1-217ENST00000527599 CRTAMO95727 393 aa11.24□□□□□ -0.61
CTNND1-217ENST00000527599 AMY2AP04746 511 aa11.24□□□□□ -0.61
CTNND1-217ENST00000527599 AMY2BP19961 511 aa11.24□□□□□ -0.61
CTNND1-217ENST00000527599 CNR2P34972 360 aa11.24□□□□□ -0.61
CTNND1-217ENST00000527599 IL13P35225 146 aa11.24□□□□□ -0.61
CTNND1-217ENST00000527599 CROTQ9UKG9 612 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms