RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 AEBP2Q6ZN18 517 aaPredicted RBP45.7■■■■■ 4.91
CTNND1-217ENST00000527599 CHIC1Q5VXU3 224 aa44.14■■■■■ 4.66
CTNND1-217ENST00000527599 PHF23Q9BUL5 403 aaPredicted RBP38.89■■■■□ 3.82
CTNND1-217ENST00000527599 SENP3Q9H4L4 574 aaPredicted RBP38.66■■■■□ 3.78
CTNND1-217ENST00000527599 FOXD1Q16676 465 aa36.06■■■■□ 3.36
CTNND1-217ENST00000527599 PLPPR3Q6T4P5 718 aa35.6■■■■□ 3.29
CTNND1-217ENST00000527599 PPP6R1Q9UPN7 881 aa34.45■■■■□ 3.11
CTNND1-217ENST00000527599 ADRA2BP18089 450 aa34.35■■■■□ 3.09
CTNND1-217ENST00000527599 PIAS4Q8N2W9 510 aaPredicted RBP33.82■■■■□ 3
CTNND1-217ENST00000527599 MSH5O43196 834 aa33.25■■■□□ 2.91
CTNND1-217ENST00000527599 PPP4R3CPQ6ZMV5 832 aa31.38■■■□□ 2.61
CTNND1-217ENST00000527599 MAPK8IP2Q13387 824 aaPredicted RBP31.33■■■□□ 2.61
CTNND1-217ENST00000527599 SCAF1Q9H7N4 1312 aaKnown RBP31.24■■■□□ 2.59
CTNND1-217ENST00000527599 POTEDQ86YR6 584 aa31.09■■■□□ 2.57
CTNND1-217ENST00000527599 DMRT2Q9Y5R5 561 aa30.86■■■□□ 2.53
CTNND1-217ENST00000527599 CNKSR2Q8WXI2 1034 aa30.53■■■□□ 2.48
CTNND1-217ENST00000527599 NCBP3Q53F19 620 aaKnown RBP30.32■■■□□ 2.44
CTNND1-217ENST00000527599 KCNA4P22459 653 aa30.26■■■□□ 2.43
CTNND1-217ENST00000527599 HOXD11P31277 338 aaPredicted RBP30.07■■■□□ 2.4
CTNND1-217ENST00000527599 RNF216Q9NWF9 866 aaPredicted RBP30.05■■■□□ 2.4
CTNND1-217ENST00000527599 NPM3O75607 178 aaKnown RBP30.02■■■□□ 2.4
CTNND1-217ENST00000527599 DCAF8L1A6NGE4 600 aa29.48■■■□□ 2.31
CTNND1-217ENST00000527599 DNAJC5BQ9UF47 199 aa29.17■■■□□ 2.26
CTNND1-217ENST00000527599 SLC4A1APQ9BWU0 796 aaKnown RBP28.66■■■□□ 2.18
CTNND1-217ENST00000527599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.59■■■□□ 2.171e-13■■■□□ 15
CTNND1-217ENST00000527599 RNF39Q9H2S5 420 aa28.55■■■□□ 2.16
CTNND1-217ENST00000527599 SLC4A2P04920 1241 aa28.5■■■□□ 2.15
CTNND1-217ENST00000527599 U3KPZ7 1027 aaPredicted RBP28.18■■■□□ 2.1
CTNND1-217ENST00000527599 C1QBPQ07021 282 aaKnown RBP28.11■■■□□ 2.09
CTNND1-217ENST00000527599 CACNB1Q02641 598 aaPredicted RBP28.02■■■□□ 2.08
CTNND1-217ENST00000527599 ZBTB22O15209 634 aa27.91■■■□□ 2.06
CTNND1-217ENST00000527599 FOXD4L1Q9NU39 408 aa27.87■■■□□ 2.05
CTNND1-217ENST00000527599 MYCNP04198 464 aaPredicted RBP27.66■■■□□ 2.02
CTNND1-217ENST00000527599 SPINK5Q9NQ38 1064 aaPredicted RBP27.53■■■□□ 2
CTNND1-217ENST00000527599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.5■■□□□ 1.99
CTNND1-217ENST00000527599 HNRNPUL2Q1KMD3 747 aaKnown RBP27.5■■□□□ 1.99
CTNND1-217ENST00000527599 SAMD1Q6SPF0 538 aaPredicted RBP27.44■■□□□ 1.98
CTNND1-217ENST00000527599 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
CTNND1-217ENST00000527599 CSRNP3Q8WYN3 585 aa27.37■■□□□ 1.97
CTNND1-217ENST00000527599 CAPN15O75808 1086 aa27.34■■□□□ 1.97
CTNND1-217ENST00000527599 APLP2Q06481 763 aa27.26■■□□□ 1.95
CTNND1-217ENST00000527599 TRHP20396 242 aaPredicted RBP27.13■■□□□ 1.93
CTNND1-217ENST00000527599 ATF5Q9Y2D1 282 aaPredicted RBP27.13■■□□□ 1.93
CTNND1-217ENST00000527599 DSG3P32926 999 aa27.04■■□□□ 1.92
CTNND1-217ENST00000527599 ZNF219Q9P2Y4 722 aaPredicted RBP27.04■■□□□ 1.92
CTNND1-217ENST00000527599 ATXN8OSP0DMR3 200 aa26.9■■□□□ 1.9
CTNND1-217ENST00000527599 ABCB7O75027 752 aa26.84■■□□□ 1.89
CTNND1-217ENST00000527599 POLA2Q14181 598 aa26.63■■□□□ 1.85
CTNND1-217ENST00000527599 ZBTB12Q9Y330 459 aaPredicted RBP26.02■■□□□ 1.76
CTNND1-217ENST00000527599 MKRN4PQ13434 485 aaPredicted RBP25.91■■□□□ 1.74
CTNND1-217ENST00000527599 FBLN2P98095 1184 aa25.79■■□□□ 1.72
CTNND1-217ENST00000527599 OSCARQ8IYS5 282 aa25.76■■□□□ 1.71
CTNND1-217ENST00000527599 RBM42Q9BTD8 480 aaKnown RBP25.63■■□□□ 1.69
CTNND1-217ENST00000527599 SPDYE2BA6NHP3 402 aa25.36■■□□□ 1.65
CTNND1-217ENST00000527599 SPDYE6P0CI01 402 aa25.36■■□□□ 1.65
CTNND1-217ENST00000527599 SPDYE2Q495Y8 402 aa25.36■■□□□ 1.65
CTNND1-217ENST00000527599 AKT1S1Q96B36 256 aa25.29■■□□□ 1.64
CTNND1-217ENST00000527599 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
CTNND1-217ENST00000527599 SSUH2Q9Y2M2 353 aa25.19■■□□□ 1.62
CTNND1-217ENST00000527599 REM2Q8IYK8 340 aaPredicted RBP25.12■■□□□ 1.61
CTNND1-217ENST00000527599 SPDYE4A6NLX3 237 aa25.02■■□□□ 1.6
CTNND1-217ENST00000527599 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
CTNND1-217ENST00000527599 PITPNM1O00562 1244 aa24.85■■□□□ 1.57
CTNND1-217ENST00000527599 CHRDL2Q6WN34 429 aa24.82■■□□□ 1.56
CTNND1-217ENST00000527599 FKBP8Q14318 412 aa24.69■■□□□ 1.54
CTNND1-217ENST00000527599 SPDYE1Q8NFV5 336 aaPredicted RBP24.68■■□□□ 1.54
CTNND1-217ENST00000527599 CLEC11AQ9Y240 323 aa24.63■■□□□ 1.53
CTNND1-217ENST00000527599 PROM2Q8N271 834 aa24.62■■□□□ 1.53
CTNND1-217ENST00000527599 POTEHQ6S545 545 aa24.49■■□□□ 1.51
CTNND1-217ENST00000527599 PIP4P2Q8N4L2 257 aa24.47■■□□□ 1.51
CTNND1-217ENST00000527599 FXR2P51116 673 aaKnown RBP eCLIP24.46■■□□□ 1.518e-11■■■■□ 20.4
CTNND1-217ENST00000527599 PRR29P0C7W0 189 aa24.34■■□□□ 1.49
CTNND1-217ENST00000527599 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
CTNND1-217ENST00000527599 PRKAR2AP13861 404 aaKnown RBP24.18■■□□□ 1.46
CTNND1-217ENST00000527599 CHADLQ6NUI6 762 aa24.15■■□□□ 1.46
CTNND1-217ENST00000527599 CREBZFQ9NS37 354 aa24.04■■□□□ 1.44
CTNND1-217ENST00000527599 FARP1Q9Y4F1 1045 aaPredicted RBP23.84■■□□□ 1.41
CTNND1-217ENST00000527599 FBXO3Q9UK99 471 aa23.8■■□□□ 1.4
CTNND1-217ENST00000527599 MNX1P50219 401 aaPredicted RBP23.78■■□□□ 1.4
CTNND1-217ENST00000527599 MIER1Q8N108 512 aa23.74■■□□□ 1.39
CTNND1-217ENST00000527599 HAX1O00165 279 aa23.72■■□□□ 1.39
CTNND1-217ENST00000527599 EVX2Q03828 476 aa23.66■■□□□ 1.38
CTNND1-217ENST00000527599 C19orf67A6NJJ6 358 aa23.64■■□□□ 1.37
CTNND1-217ENST00000527599 PLCD3Q8N3E9 789 aa23.63■■□□□ 1.37
CTNND1-217ENST00000527599 VASPP50552 380 aaPredicted RBP23.59■■□□□ 1.37
CTNND1-217ENST00000527599 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
CTNND1-217ENST00000527599 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
CTNND1-217ENST00000527599 CD44P16070 742 aaKnown RBP23.45■■□□□ 1.34
CTNND1-217ENST00000527599 SP7Q8TDD2 431 aaPredicted RBP23.37■■□□□ 1.33
CTNND1-217ENST00000527599 ZBTB47Q9UFB7 747 aaPredicted RBP23.32■■□□□ 1.32
CTNND1-217ENST00000527599 IFNLR1Q8IU57 520 aaPredicted RBP23.31■■□□□ 1.32
CTNND1-217ENST00000527599 NUBP1P53384 320 aa23.26■■□□□ 1.31
CTNND1-217ENST00000527599 RASEFQ8IZ41 740 aa23.26■■□□□ 1.31
CTNND1-217ENST00000527599 ZRANB1Q9UGI0 708 aa23.26■■□□□ 1.31
CTNND1-217ENST00000527599 KLHL34Q8N239 644 aa23.21■■□□□ 1.31
CTNND1-217ENST00000527599 TSPYL2Q9H2G4 693 aaPredicted RBP23.17■■□□□ 1.3
CTNND1-217ENST00000527599 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.29
CTNND1-217ENST00000527599 ZNF579Q8NAF0 562 aaKnown RBP23.14■■□□□ 1.29
CTNND1-217ENST00000527599 PHF12Q96QT6 1004 aa23.08■■□□□ 1.29
CTNND1-217ENST00000527599 GABBR2O75899 941 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms