RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 CDH23Q9H251 3354 aa12.01□□□□□ -0.49
RBBP4-216ENST00000525506 ESYT2A0FGR8 921 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 SPATA31C2B4DYI2 1134 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 HAS3O00219 553 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 F2P00734 622 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 TGFB3P10600 412 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 HOXD8P13378 290 aaPredicted RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 FOSL2P15408 326 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 IFNAR1P17181 557 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 PDIA3P30101 505 aaKnown RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 BFSP2Q13515 415 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 C8orf34Q49A92 452 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 CYFIP1Q7L576 1253 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 HEATR3Q7Z4Q2 680 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 SESTD1Q86VW0 696 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 C7orf31Q8N865 590 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 IL27Q8NEV9 243 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 MAFAQ8NHW3 353 aaPredicted RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 CCDC12Q8WUD4 166 aaPredicted RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 WNT8BQ93098 351 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 INPP4AQ96PE3 977 aaPredicted RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
RBBP4-216ENST00000525506 MTIF3Q9H2K0 278 aaKnown RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 PDRG1Q9NUG6 133 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 NAP1L2Q9ULW6 460 aaPredicted RBP12□□□□□ -0.49
RBBP4-216ENST00000525506 SLC4A7Q9Y6M7 1214 aa12□□□□□ -0.49
RBBP4-216ENST00000525506 CHD7Q9P2D1 2997 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 PRPF3O43395 683 aaKnown RBP11.99□□□□□ -0.49
RBBP4-216ENST00000525506 PPFIA4O75335 1185 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 LGALS2P05162 132 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 ICAM3P32942 547 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
RBBP4-216ENST00000525506 SP4Q02446 784 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 GPNMBQ14956 572 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 NTRK3Q16288 839 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 PFKFB3Q16875 520 aaPredicted RBP11.99□□□□□ -0.49
RBBP4-216ENST00000525506 GNPTABQ3T906 1256 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 PCNX4Q63HM2 1172 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 WWC2Q6AWC2 1192 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 MCTP2Q6DN12 878 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 C16orf70Q9BSU1 422 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 KATNAL1Q9BW62 490 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 PRDM12Q9H4Q4 367 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 MSRAQ9UJ68 235 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 UNC80Q8N2C7 3258 aa11.99□□□□□ -0.49
RBBP4-216ENST00000525506 STXBP3O00186 592 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 NOP56O00567 594 aaKnown RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 ATP9AO75110 1047 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 FOSP01100 380 aaPredicted RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 CKBP12277 381 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 SCG2P13521 617 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 AP3B2Q13367 1082 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 TCTN1Q2MV58 587 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 TRIM71Q2Q1W2 868 aaKnown RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 UTP14CQ5TAP6 766 aaKnown RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 TYW1BQ6NUM6 668 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 CPLX2Q6PUV4 134 aaKnown RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 PGBD1Q96JS3 809 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 GPR20Q99678 358 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 EHMT1Q9H9B1 1298 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 RIC8AQ9NPQ8 531 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 PKD2L1Q9P0L9 805 aa11.98□□□□□ -0.49
RBBP4-216ENST00000525506 V9GY48 417 aaPredicted RBP11.98□□□□□ -0.49
RBBP4-216ENST00000525506 SPDYE3A6NKU9 549 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 H3BRB1 525 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 DLL1O00548 723 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 FIBPO43427 364 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 NBNO60934 754 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 CDKL5O76039 1030 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 PFKMP08237 780 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 SMIM10L2AP0DMW4 78 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 SMIM10L2BP0DMW5 78 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 SELPP16109 830 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 ITGB5P18084 799 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 RFC2P35250 354 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 NAPAP54920 295 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 AKAP17AQ02040 695 aaKnown RBP11.97□□□□□ -0.49
RBBP4-216ENST00000525506 NEDD9Q14511 834 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 RAB30Q15771 203 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 ZNF618Q5T7W0 954 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 METTL7BQ6UX53 244 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 LRRC8DQ7L1W4 858 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
RBBP4-216ENST00000525506 TRIM22Q8IYM9 498 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 CCDC155Q8N6L0 562 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 USP38Q8NB14 1042 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 CCDC148Q8NFR7 591 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 CAGE1Q8TC20 777 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 AFAP1L1Q8TED9 768 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 CDHR1Q96JP9 859 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 TUT1Q9H6E5 874 aaKnown RBP11.97□□□□□ -0.49
RBBP4-216ENST00000525506 SH3GLB2Q9NR46 395 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 PCDHA6Q9UN73 950 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms