RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 RSPH10BP0C881 870 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 UBA1P22314 1058 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 KCNA5P22460 613 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 SERINC5Q86VE9 423 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 MYOCDQ8IZQ8 938 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 ATP6V0A1Q93050 837 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 MTMR8Q96EF0 704 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 C11orf16Q9NQ32 467 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 MAP3K20Q9NYL2 800 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 CTNNA3Q9UI47 895 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 MAD2L2Q9UI95 211 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 TRIOO75962 3097 aa11.1□□□□□ -0.63
TRAPPC4-206ENST00000525303 WDFY4Q6ZS81 3184 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 COL4A6Q14031 1691 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 C17orf102A2RUQ5 167 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 H3BRB1 525 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 GPR37L1O60883 481 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 TGFB3P10600 412 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 CCND2P30279 289 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 SEC23AQ15436 765 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 PLEKHG4Q58EX7 1191 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 BCAS3Q9H6U6 928 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 MLXIPQ9HAP2 919 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 EVPLQ92817 2033 aa11.09□□□□□ -0.63
TRAPPC4-206ENST00000525303 WDR81Q562E7 1941 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 PI4K2BG5E9Z4 385 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 GCOM1H8Y6P7 765 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 TREHO43280 583 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 LGALS2P05162 132 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 CTSHP09668 335 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 POLR2MP0CAP2 368 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 IL9P15248 144 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 HOXC8P31273 242 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 SLC35G1Q2M3R5 365 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 LEXMQ3ZCV2 418 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 EPC2Q52LR7 807 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 BMP2KLQ5H9B9 411 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 CYB5R4Q7L1T6 521 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 FAM178BQ8IXR5 827 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 SAMD3Q8N6K7 520 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 MRPL38Q96DV4 380 aaKnown RBP11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 PIGSQ96S52 555 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 YME1L1Q96TA2 773 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 OSBPL7Q9BZF2 842 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 IL25Q9H293 177 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 RNPEPQ9H4A4 650 aa11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 ARIH1Q9Y4X5 557 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC4-206ENST00000525303 PLXNA4Q9HCM2 1894 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 NOP56O00567 594 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 UPP2O95045 317 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 GRM4Q14833 912 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 CASC1Q6TDU7 716 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 GJD3Q8N144 294 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 SEPT8Q92599 483 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 SAMD11Q96NU1 681 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 RIOX1Q9H6W3 641 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 MYH9P35579 1960 aaKnown RBP11.07□□□□□ -0.64
TRAPPC4-206ENST00000525303 PIEZO1Q92508 2521 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 ZNF318Q5VUA4 2279 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 PNMA6FA0A0J9YX94 578 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 H3BQ06 376 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 CYTH3O43739 400 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 GSPT1P15170 499 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 SSTR3P32745 418 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 MRPS9P82933 396 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 TRDNQ13061 729 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 TRAF1Q13077 416 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 GPM6BQ13491 265 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 PTPROQ16827 1216 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 GNPTABQ3T906 1256 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 TIGD5Q53EQ6 642 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 CYFIP1Q7L576 1253 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 TRIM50Q86XT4 487 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 BANK1Q8NDB2 785 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 TOP1MTQ969P6 601 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 USP26Q9BXU7 913 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 SENP2Q9HC62 589 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 RTEL1Q9NZ71 1219 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 FNDC1Q4ZHG4 1894 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 FRMPD4Q14CM0 1322 aa11.06□□□□□ -0.64
TRAPPC4-206ENST00000525303 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
TRAPPC4-206ENST00000525303 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
TRAPPC4-206ENST00000525303 H3BNC9 293 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms