RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 BUD31P41223 144 aaPredicted RBP8.13□□□□□ -1.11
COPB1-203ENST00000525214 RTP5Q14D33 572 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 RBM12BQ8IXT5 1001 aaKnown RBP8.13□□□□□ -1.11
COPB1-203ENST00000525214 CLEC4DQ8WXI8 215 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 EXOC2Q96KP1 924 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 KCNJ15Q99712 375 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 NKRFO15226 690 aaKnown RBP eCLIP8.12□□□□□ -1.11
COPB1-203ENST00000525214 SOD2P04179 222 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 SYN1P17600 705 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 SCUBE1Q8IWY4 988 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 UHMK1Q8TAS1 419 aaKnown RBP8.12□□□□□ -1.11
COPB1-203ENST00000525214 ZSWIM3Q96MP5 696 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 LNPKQ9C0E8 428 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 IPPKQ9H8X2 491 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 USP40Q9NVE5 1235 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 HSPBP1Q9NZL4 362 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 RBPJLQ9UBG7 517 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 TELO2Q9Y4R8 837 aa8.12□□□□□ -1.11
COPB1-203ENST00000525214 TRBV23-1A0A0A0MS06 115 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 MAFKO60675 156 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 LTFP02788 710 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
COPB1-203ENST00000525214 ZFYVE27Q5T4F4 411 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 PROSER1Q86XN7 944 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 TTLL11Q8NHH1 800 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 DEPDC7Q96QD5 511 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 SNTG2Q9NY99 539 aa8.11□□□□□ -1.11
COPB1-203ENST00000525214 GNAT1P11488 350 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 ZNF28P17035 718 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 GJA9P57773 515 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 GRIN1Q05586 938 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 TUSC3Q13454 348 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 FERMT3Q86UX7 667 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 CDC6Q99741 560 aa8.1□□□□□ -1.11
COPB1-203ENST00000525214 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.11
COPB1-203ENST00000525214 DDX3XO00571 662 aaKnown RBP eCLIP8.09□□□□□ -1.11
COPB1-203ENST00000525214 SUMO1P63165 101 aaKnown RBP8.09□□□□□ -1.11
COPB1-203ENST00000525214 TMC5Q6UXY8 1006 aa8.09□□□□□ -1.11
COPB1-203ENST00000525214 MAMDC2Q7Z304 686 aaPredicted RBP8.09□□□□□ -1.11
COPB1-203ENST00000525214 LRP10Q7Z4F1 713 aa8.09□□□□□ -1.11
COPB1-203ENST00000525214 TRIM48Q8IWZ4 208 aa8.09□□□□□ -1.11
COPB1-203ENST00000525214 DDX1Q92499 740 aaKnown RBP8.09□□□□□ -1.11
COPB1-203ENST00000525214 PTPRN2Q92932 1015 aa8.09□□□□□ -1.11
COPB1-203ENST00000525214 PDGFDQ9GZP0 370 aaPredicted RBP8.09□□□□□ -1.11
COPB1-203ENST00000525214 TCRBV5S4A2TA0A5A2 114 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 FAM47E-STBD1D6RA91 191 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 SPIRE1Q08AE8 756 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 RGL3Q3MIN7 710 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 FAM26FQ5R3K3 315 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 MCTP2Q6DN12 878 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 DPH6Q7L8W6 267 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 SH3RF2Q8TEC5 729 aa8.08□□□□□ -1.12
COPB1-203ENST00000525214 CNR2P34972 360 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 MLLT6P55198 1093 aaPredicted RBP8.07□□□□□ -1.12
COPB1-203ENST00000525214 LONRF2Q1L5Z9 754 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 TXNDC5Q8NBS9 432 aaKnown RBP8.07□□□□□ -1.12
COPB1-203ENST00000525214 ZCCHC14Q8WYQ9 949 aaKnown RBP8.07□□□□□ -1.12
COPB1-203ENST00000525214 KISS1RQ969F8 398 aaPredicted RBP8.07□□□□□ -1.12
COPB1-203ENST00000525214 TMEM209Q96SK2 561 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 ALG1Q9BT22 464 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 BDH2Q9BUT1 245 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 KRTAP9-3Q9BYQ3 159 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 DSEQ9UL01 958 aa8.07□□□□□ -1.12
COPB1-203ENST00000525214 MRPS23Q9Y3D9 190 aaKnown RBP8.07□□□□□ -1.12
COPB1-203ENST00000525214 AQP7O14520 342 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 WNT9AO14904 365 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 CELA3BP08861 270 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 EPHA5P54756 1037 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 PAN2Q504Q3 1202 aaKnown RBP8.06□□□□□ -1.12
COPB1-203ENST00000525214 UBXN11Q5T124 520 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 PCDH19Q8TAB3 1148 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 CLIC6Q96NY7 704 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 DHRS4Q9BTZ2 278 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 PCDHA8Q9Y5H6 950 aa8.06□□□□□ -1.12
COPB1-203ENST00000525214 ARVCFO00192 962 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 FAHP16930 419 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 PAK1Q13153 545 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 KCTD1Q719H9 257 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.05□□□□□ -1.12
COPB1-203ENST00000525214 MTDHQ86UE4 582 aaKnown RBP8.05□□□□□ -1.12
COPB1-203ENST00000525214 DTX3Q8N9I9 347 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 YTHDC1Q96MU7 727 aaKnown RBP8.05□□□□□ -1.12
COPB1-203ENST00000525214 DNAJC7Q99615 494 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 CD244Q9BZW8 370 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 CROTQ9UKG9 612 aa8.05□□□□□ -1.12
COPB1-203ENST00000525214 MROH6A6NGR9 719 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 ACOT7O00154 380 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 COL6A1P12109 1028 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 IL13P35225 146 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 GABREP78334 506 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 SF3A1Q15459 793 aaKnown RBP8.04□□□□□ -1.12
COPB1-203ENST00000525214 PHF19Q5T6S3 580 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 PRAMEF18Q5VWM3 479 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 JMYQ8N9B5 988 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 PMFBP1Q8TBY8 1022 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 MKL1Q969V6 931 aa8.04□□□□□ -1.12
COPB1-203ENST00000525214 SRPK1Q96SB4 655 aaKnown RBP8.04□□□□□ -1.12
COPB1-203ENST00000525214 CD276Q5ZPR3 534 aa8.03□□□□□ -1.12
COPB1-203ENST00000525214 MBD6Q96DN6 1003 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms