RNA–Protein interactions for RNA: ENST00000524554.5

CAPN11-202, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,501 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-202ENST00000524554 ADGRF4Q8IZF3 695 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 PNMA1Q8ND90 353 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 OR6J1Q8NGC5 347 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 LEO1Q8WVC0 666 aaPredicted RBP11.21□□□□□ -0.61
CAPN11-202ENST00000524554 PHKBQ93100 1093 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 MTG1Q9BT17 334 aaPredicted RBP11.21□□□□□ -0.61
CAPN11-202ENST00000524554 NKX2-4Q9H2Z4 354 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 COL20A1Q9P218 1284 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
CAPN11-202ENST00000524554 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
CAPN11-202ENST00000524554 MYH8P13535 1937 aa11.21□□□□□ -0.62
CAPN11-202ENST00000524554 PRPF3O43395 683 aaKnown RBP11.2□□□□□ -0.62
CAPN11-202ENST00000524554 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
CAPN11-202ENST00000524554 MYOGP15173 224 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 CPT1AP50416 773 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 TROAPQ12815 778 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 RPUSD2Q8IZ73 545 aaKnown RBP11.2□□□□□ -0.62
CAPN11-202ENST00000524554 SYTL5Q8TDW5 730 aaPredicted RBP11.2□□□□□ -0.62
CAPN11-202ENST00000524554 SCFD2Q8WU76 684 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 RCOR1Q9UKL0 485 aa11.2□□□□□ -0.62
CAPN11-202ENST00000524554 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
CAPN11-202ENST00000524554 SUPT20HL2P0C7V6 817 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 KRT40Q6A162 431 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 FAM173BQ6P4H8 233 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 PPM1EQ8WY54 764 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 LZTS2Q9BRK4 669 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 JMJD4Q9H9V9 463 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 TMEM63CQ9P1W3 806 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 PLXNA1Q9UIW2 1896 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 SPTBN5Q9NRC6 3674 aaKnown RBP11.19□□□□□ -0.62
CAPN11-202ENST00000524554 KPNA6O60684 536 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 PPFIA3O75145 1194 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 YEATS4O95619 227 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 RAB30Q15771 203 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 CDC37Q16543 378 aaPredicted RBP11.19□□□□□ -0.62
CAPN11-202ENST00000524554 QRICH1Q2TAL8 776 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 LRSAM1Q6UWE0 723 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 DEFB128Q7Z7B8 93 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 AFG1LQ8WV93 481 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 GRPEL1Q9HAV7 217 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 RTEL1Q9NZ71 1219 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 SLC4A7Q9Y6M7 1214 aa11.19□□□□□ -0.62
CAPN11-202ENST00000524554 OPLAHO14841 1288 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 IQCF3P0C7M6 154 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 U2AF2P26368 475 aaKnown RBP eCLIP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 GPNMBQ14956 572 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 CCDC85BQ15834 202 aaPredicted RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 MYSM1Q5VVJ2 828 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 TMTC3Q6ZXV5 915 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 BICD2Q8TD16 824 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 NSUN6Q8TEA1 469 aaKnown RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 ANP32BQ92688 251 aaKnown RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 KAT2BQ92831 832 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 PKNOX2Q96KN3 472 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 USP28Q96RU2 1077 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 GAS2L1Q99501 681 aaPredicted RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 MAF1Q9H063 256 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 MTIF3Q9H2K0 278 aaKnown RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 FOXP1Q9H334 677 aaPredicted RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 SLC28A3Q9HAS3 691 aa11.18□□□□□ -0.62
CAPN11-202ENST00000524554 DDX19AQ9NUU7 478 aaKnown RBP11.18□□□□□ -0.62
CAPN11-202ENST00000524554 MYH4Q9Y623 1939 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 RRP9O43818 475 aaKnown RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 PPP1R11O60927 126 aaPredicted RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 MMP1P03956 469 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 PARP1P09874 1014 aaKnown RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 IGFBP4P22692 258 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 ARHGAP1Q07960 439 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 STK38Q15208 465 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 ASPRV1Q53RT3 343 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 BRDTQ58F21 947 aaPredicted RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 FAM47CQ5HY64 1035 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 FAM177A1Q8N128 213 aaPredicted RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 IWS1Q96ST2 819 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 RMDN3Q96TC7 470 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 MPHOSPH6Q99547 160 aaKnown RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 DDX41Q9UJV9 622 aaKnown RBP11.17□□□□□ -0.62
CAPN11-202ENST00000524554 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 ABCB11O95342 1321 aa11.17□□□□□ -0.62
CAPN11-202ENST00000524554 SYCE3A1L190 88 aa11.16□□□□□ -0.62
CAPN11-202ENST00000524554 ZBBXA8MT70 800 aa11.16□□□□□ -0.62
CAPN11-202ENST00000524554 B4DLN1 442 aa11.16□□□□□ -0.62
CAPN11-202ENST00000524554 RGS20O76081 388 aa11.16□□□□□ -0.62
CAPN11-202ENST00000524554 NR3C2P08235 984 aa11.16□□□□□ -0.62
CAPN11-202ENST00000524554 SMARCA1P28370 1054 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms