RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 CASP1P29466 404 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 SFNP31947 248 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 PRCPP42785 496 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 JAK3P52333 1124 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 STX17P56962 302 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 KRT76Q01546 638 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 LRRC63Q05C16 580 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 SNAPC2Q13487 334 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 MTMR1Q13613 665 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 BAATQ14032 418 aaPredicted RBP11.11□□□□□ -0.63
VPS13B-212ENST00000524330 OTOP1Q7RTM1 612 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 TMC6Q7Z403 805 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 GUF1Q8N442 669 aaKnown RBP11.11□□□□□ -0.63
VPS13B-212ENST00000524330 SYT2Q8N9I0 419 aaPredicted RBP11.11□□□□□ -0.63
VPS13B-212ENST00000524330 CCDC112Q8NEF3 446 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 DNERQ8NFT8 737 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 DDX12PQ92771 950 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 P2RX5Q93086 422 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 SLC10A4Q96EP9 437 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.11□□□□□ -0.63
VPS13B-212ENST00000524330 VAV3Q9UKW4 847 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 KCNH4Q9UQ05 1017 aa11.11□□□□□ -0.63
VPS13B-212ENST00000524330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
VPS13B-212ENST00000524330 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 MYMKA6NI61 221 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 POTECB2RU33 542 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 P4HBP07237 508 aaKnown RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 MYCLP12524 364 aaPredicted RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 ZNF18P17022 549 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 EIF2AK2P19525 551 aaKnown RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 SFPQP23246 707 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 CLCN1P35523 988 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 SPIRE1Q08AE8 756 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 TRIM14Q14142 442 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 TMEM132BQ14DG7 1078 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 PGM5Q15124 567 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 MUM1L1Q5H9M0 696 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 FAM26FQ5R3K3 315 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 LBX2Q6XYB7 198 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 PPFIBP1Q86W92 1011 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 CATSPER3Q86XQ3 398 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 TRMT44Q8IYL2 757 aaKnown RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 MYOCDQ8IZQ8 938 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 REPS2Q8NFH8 660 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 TAAR1Q96RJ0 339 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 P2RX7Q99572 595 aaKnown RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 PDCD2LQ9BRP1 358 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 ZSWIM4Q9H7M6 989 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 ZNF214Q9UL59 606 aaPredicted RBP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS13B-212ENST00000524330 COL4A3BPQ9Y5P4 624 aa11.1□□□□□ -0.63
VPS13B-212ENST00000524330 WDR90Q96KV7 1748 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 ARHGEF35A5YM69 484 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 E9PMD0 336 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 CHMP2AO43633 222 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 MED24O75448 989 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 NR3C2P08235 984 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 TAL1P17542 331 aaPredicted RBP11.09□□□□□ -0.63
VPS13B-212ENST00000524330 PTGS1P23219 599 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 UBXN2AP68543 259 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 CCNA1P78396 465 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
VPS13B-212ENST00000524330 CDKAL1Q5VV42 579 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 VSTM4Q8IW00 320 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 TPH2Q8IWU9 490 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 CSGALNACT2Q8N6G5 542 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 C2orf69Q8N8R5 385 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 IQCDQ96DY2 449 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 NUDT12Q9BQG2 462 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 TIPINQ9BVW5 301 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 AGO4Q9HCK5 861 aaKnown RBP11.09□□□□□ -0.63
VPS13B-212ENST00000524330 KCNH7Q9NS40 1196 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 LIMA1Q9UHB6 759 aaKnown RBP11.09□□□□□ -0.63
VPS13B-212ENST00000524330 GDAQ9Y2T3 454 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 LOXHD1Q8IVV2 1947 aa11.09□□□□□ -0.63
VPS13B-212ENST00000524330 PARP14Q460N5 1801 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 A0A1B0GTH6 734 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 WDR64B1ANS9 1081 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 KCNJ18B7U540 433 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 IRF6O14896 467 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 N4BP3O15049 544 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 FAM13AO94988 1023 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms