RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 LINC00482Q8N8I6 264 aa6.71□□□□□ -1.34
SREK1-213ENST00000523655 ZSWIM3Q96MP5 696 aa6.71□□□□□ -1.34
SREK1-213ENST00000523655 DNAJC2Q99543 621 aaKnown RBP6.71□□□□□ -1.34
SREK1-213ENST00000523655 RBPJLQ9UBG7 517 aa6.71□□□□□ -1.34
SREK1-213ENST00000523655 WASF3Q9UPY6 502 aa6.71□□□□□ -1.34
SREK1-213ENST00000523655 MED1Q15648 1581 aaPredicted RBP6.7□□□□□ -1.34
SREK1-213ENST00000523655 SHROOM2Q13796 1616 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 ADCY10Q96PN6 1610 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 ANKRD62A6NC57 917 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 MYO1BO43795 1136 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 CELA3BP08861 270 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 ATP2B1P20020 1258 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 CNR2P34972 360 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 SLC6A11P48066 632 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 KCNT2Q6UVM3 1135 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 USP53Q70EK8 1073 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 FAM126BQ8IXS8 530 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 ADAMTS17Q8TE56 1095 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 HIRIP3Q9BW71 556 aaPredicted RBP6.7□□□□□ -1.34
SREK1-213ENST00000523655 CDIP1Q9H305 208 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 NTMQ9P121 344 aa6.7□□□□□ -1.34
SREK1-213ENST00000523655 WDR97A6NE52 1622 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 NUP160Q12769 1436 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 TCRBV5S2A0A599 114 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 PRODHO43272 600 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 THBS2P35442 1172 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 PLP2Q04941 152 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 TESK1Q15569 626 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 UBXN11Q5T124 520 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 STEAP3Q658P3 488 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 MCTP2Q6DN12 878 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 PRRT2Q7Z6L0 340 aaPredicted RBP6.69□□□□□ -1.34
SREK1-213ENST00000523655 ARHGEF4Q9NR80 690 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 COA3Q9Y2R0 106 aaPredicted RBP6.69□□□□□ -1.34
SREK1-213ENST00000523655 PRDM2Q13029 1718 aa6.69□□□□□ -1.34
SREK1-213ENST00000523655 GRIN2AQ12879 1464 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 DDX3XO00571 662 aaKnown RBP eCLIP6.68□□□□□ -1.34
SREK1-213ENST00000523655 HGSO14964 777 aaPredicted RBP6.68□□□□□ -1.34
SREK1-213ENST00000523655 GTF2A2P52657 109 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 ADAM9Q13443 819 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 NTRK3Q16288 839 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 PHF19Q5T6S3 580 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 TTLL7Q6ZT98 887 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 KYQ8NBH2 561 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.68□□□□□ -1.34
SREK1-213ENST00000523655 KCTD13Q8WZ19 329 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 PHF20Q9BVI0 1012 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 NPFFR2Q9Y5X5 522 aa6.68□□□□□ -1.34
SREK1-213ENST00000523655 GLI2P10070 1586 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 H7BY64 318 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 AGRPO00253 132 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 TADA3O75528 432 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 COL6A2P12110 1019 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 GTF2F1P35269 517 aaKnown RBP eCLIP6.67□□□□□ -1.34
SREK1-213ENST00000523655 NFKB2Q00653 900 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 GRIN1Q05586 938 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 RBL2Q08999 1139 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 PIP4K2CQ8TBX8 421 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 OSBP2Q969R2 916 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 YIPF4Q9BSR8 244 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 TMA7Q9Y2S6 64 aaKnown RBP6.67□□□□□ -1.34
SREK1-213ENST00000523655 PCDHB4Q9Y5E5 795 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 KIF21BO75037 1637 aa6.67□□□□□ -1.34
SREK1-213ENST00000523655 TEX14Q8IWB6 1497 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 ADAMTSL3P82987 1691 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 TLDC2A0PJX2 215 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 SLC27A2O14975 620 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 LRG1P02750 347 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 LTFP02788 710 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 RPL13P26373 211 aaKnown RBP6.66□□□□□ -1.34
SREK1-213ENST00000523655 HSPA1LP34931 641 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 GJA9P57773 515 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 MAP4K2Q12851 820 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 RGL3Q3MIN7 710 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 CCDC144BQ3MJ40 725 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 PRR31Q5SQ13 230 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 TMC5Q6UXY8 1006 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 ZNF662Q6ZS27 426 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 ZC3H18Q86VM9 953 aaKnown RBP6.66□□□□□ -1.34
SREK1-213ENST00000523655 KCNJ15Q99712 375 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 CHMP4AQ9BY43 222 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 EPN3Q9H201 632 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 ZNF652Q9Y2D9 606 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 ASXL2Q76L83 1435 aa6.66□□□□□ -1.34
SREK1-213ENST00000523655 DGKIO75912 1065 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 RAB33AQ14088 237 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 HSP90AA2PQ14568 343 aaPredicted RBP6.65□□□□□ -1.34
SREK1-213ENST00000523655 ZFYVE27Q5T4F4 411 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 SPATC1Q76KD6 591 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 AARSD1Q9BTE6 412 aaKnown RBP6.65□□□□□ -1.34
SREK1-213ENST00000523655 DTLQ9NZJ0 730 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 MYOTQ9UBF9 498 aa6.65□□□□□ -1.34
SREK1-213ENST00000523655 ARID4BQ4LE39 1312 aaPredicted RBP6.65□□□□□ -1.35
SREK1-213ENST00000523655 CCDC85CA6NKD9 419 aa6.64□□□□□ -1.35
SREK1-213ENST00000523655 PABPC1P11940 636 aaKnown RBP6.64□□□□□ -1.35
SREK1-213ENST00000523655 MLLT6P55198 1093 aaPredicted RBP6.64□□□□□ -1.35
SREK1-213ENST00000523655 NKX3-2P78367 333 aa6.64□□□□□ -1.35
SREK1-213ENST00000523655 EMC4Q5J8M3 183 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms