RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
PVT1-213ENST00000522414 MYADML2A6NDP7 307 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 ATP2A1O14983 1001 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 SLC3A2P08195 630 aaKnown RBP9.5□□□□□ -0.89
PVT1-213ENST00000522414 CNTN2Q02246 1040 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 SNX17Q15036 470 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
PVT1-213ENST00000522414 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
PVT1-213ENST00000522414 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 KCTD1Q719H9 257 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 RASGRP2Q7LDG7 609 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 RNF180Q86T96 592 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 ANKRD35Q8N283 1001 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 GMCL1P1Q8NEA9 526 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 NRBP1Q9UHY1 535 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 FAM184BQ9ULE4 1060 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 CNPY2Q9Y2B0 182 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 DDX49Q9Y6V7 483 aaKnown RBP9.5□□□□□ -0.89
PVT1-213ENST00000522414 SALL3Q9BXA9 1300 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 PRUNE2Q8WUY3 3088 aa9.5□□□□□ -0.89
PVT1-213ENST00000522414 PIK3R2O00459 728 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 ADCY6O43306 1168 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 RANBP6O60518 1105 aaKnown RBP9.49□□□□□ -0.89
PVT1-213ENST00000522414 PQBP1O60828 265 aaKnown RBP9.49□□□□□ -0.89
PVT1-213ENST00000522414 ADAMTS4O75173 837 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 FGAP02671 866 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 AKR1A1P14550 325 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 PTGS1P23219 599 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 COPB2P35606 906 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 ACLYP53396 1101 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 PDE1AP54750 535 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 EPHB4P54760 987 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 ACVR2BQ13705 512 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 KCNA10Q16322 511 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 CCDC144BQ3MJ40 725 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 MAMDC4Q6UXC1 1216 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 KLHDC9Q8NEP7 349 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 FAM227BQ96M60 508 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 FGD4Q96M96 766 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 ZCCHC2Q9C0B9 1178 aaKnown RBP9.49□□□□□ -0.89
PVT1-213ENST00000522414 PDLIM7Q9NR12 457 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 NOP53Q9NZM5 478 aaKnown RBP9.49□□□□□ -0.89
PVT1-213ENST00000522414 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
PVT1-213ENST00000522414 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
PVT1-213ENST00000522414 PLIN4Q96Q06 1357 aa9.49□□□□□ -0.89
PVT1-213ENST00000522414 A0A1W2PQ45 241 aaPredicted RBP9.48□□□□□ -0.89
PVT1-213ENST00000522414 A0A1W2PQY0 241 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 TSPY2A6NKD2 308 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 DLL1O00548 723 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 SLC1A4P43007 532 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 IKQ13123 557 aaPredicted RBP9.48□□□□□ -0.89
PVT1-213ENST00000522414 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 TMEM63BQ5T3F8 832 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 C1orf53Q5VUE5 145 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 CCSAPQ6IQ19 270 aaPredicted RBP9.48□□□□□ -0.89
PVT1-213ENST00000522414 TTBK2Q6IQ55 1244 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 RCSD1Q6JBY9 416 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 CCDC174Q6PII3 467 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 CCDC144CPQ8IYA2 1237 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 MSL3Q8N5Y2 521 aaKnown RBP9.48□□□□□ -0.89
PVT1-213ENST00000522414 CHST13Q8NET6 341 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 CHURC1Q8WUH1 139 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 STAG1Q8WVM7 1258 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 VTI1AQ96AJ9 217 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 EVI5LQ96CN4 794 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 TRIM11Q96F44 468 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 YTHDC1Q96MU7 727 aaKnown RBP9.48□□□□□ -0.89
PVT1-213ENST00000522414 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 TMEM39AQ9NV64 488 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 ZNF536O15090 1300 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 SYNRGQ9UMZ2 1314 aa9.48□□□□□ -0.89
PVT1-213ENST00000522414 MYH4Q9Y623 1939 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 DUSP11O75319 330 aaKnown RBP9.47□□□□□ -0.89
PVT1-213ENST00000522414 CLTBP09497 229 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 ALAS1P13196 640 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 SLC16A2P36021 539 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 STAT2P52630 851 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 OAZ1P54368 228 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 FAAP100Q0VG06 881 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
PVT1-213ENST00000522414 MUM1L1Q5H9M0 696 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 RRP12Q5JTH9 1297 aaKnown RBP9.47□□□□□ -0.89
PVT1-213ENST00000522414 ARMCX2Q7L311 632 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 FCHSD1Q86WN1 690 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 FAM133AQ8N9E0 248 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 RHBDD1Q8TEB9 315 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 GUCD1Q96NT3 240 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 KATNBL1Q9H079 304 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 ABHD16BQ9H3Z7 469 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 HELLSQ9NRZ9 838 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 TOMM22Q9NS69 142 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 FBXO40Q9UH90 709 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 ANAPC4Q9UJX5 808 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 PRR12Q9ULL5 1215 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
PVT1-213ENST00000522414 STXBP5LQ9Y2K9 1186 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms