RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 PCDHGA9Q9Y5G4 932 aaKnown RBP6.77□□□□□ -1.33
RFC1-216ENST00000514572 PCDHGA8Q9Y5G5 932 aa6.77□□□□□ -1.33
RFC1-216ENST00000514572 PCDHGA7Q9Y5G6 932 aa6.77□□□□□ -1.33
RFC1-216ENST00000514572 PCDHGA6Q9Y5G7 932 aa6.77□□□□□ -1.33
RFC1-216ENST00000514572 PCDHGA3Q9Y5H0 932 aa6.77□□□□□ -1.33
RFC1-216ENST00000514572 PCDHGA2Q9Y5H1 932 aa6.77□□□□□ -1.33
RFC1-216ENST00000514572 SNX11Q9Y5W9 270 aa6.77□□□□□ -1.33
RFC1-216ENST00000514572 WASHC2AQ641Q2 1341 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 EIF3JO75822 258 aaKnown RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 U2AF1L5P0DN76 240 aaPredicted RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 FPR2P25090 351 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 IRF9Q00978 393 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 U2AF1Q01081 240 aaKnown RBP eCLIP6.76□□□□□ -1.33
RFC1-216ENST00000514572 ODF1Q14990 250 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 IFI16Q16666 785 aaKnown RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 FIGNQ5HY92 759 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 ANGEL2Q5VTE6 544 aaKnown RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 EPM2AIP1Q7L775 607 aaPredicted RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 OTOP3Q7RTS5 596 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 KIAA1958Q8N8K9 716 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 NAT16Q8N8M0 369 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 NLGN2Q8NFZ4 835 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 PLEKHO2Q8TD55 490 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 FBXO41Q8TF61 875 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 DLG3Q92796 817 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 TMEM169Q96HH4 297 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 NUP88Q99567 741 aaPredicted RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 ELF4Q99607 663 aaPredicted RBP6.76□□□□□ -1.33
RFC1-216ENST00000514572 KCNJ15Q99712 375 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 MTA3Q9BTC8 594 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 ATP13A1Q9HD20 1204 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 OBP2AQ9NY56 170 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 ANKRD6Q9Y2G4 727 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 GIT1Q9Y2X7 761 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 B3GALT1Q9Y5Z6 326 aa6.76□□□□□ -1.33
RFC1-216ENST00000514572 SSU72P8A0A1W2PR75 194 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 VSTM5A8MXK1 200 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 C1QTNF9BB2RNN3 333 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 PLIN1O60240 522 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 SNUPNO95149 360 aaKnown RBP6.75□□□□□ -1.33
RFC1-216ENST00000514572 ZRANB2O95218 330 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-216ENST00000514572 CFBP00751 764 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 PF4V1P10720 104 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 LPOP22079 712 aaPredicted RBP6.75□□□□□ -1.33
RFC1-216ENST00000514572 GPR3P46089 330 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 EGR3Q06889 387 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 TCIRG1Q13488 830 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 BIRC2Q13490 618 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 ESRP1Q6NXG1 681 aaKnown RBP6.75□□□□□ -1.33
RFC1-216ENST00000514572 ARHGAP36Q6ZRI8 547 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 SLCO6A1Q86UG4 719 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 PTRH1Q86Y79 214 aaKnown RBP6.75□□□□□ -1.33
RFC1-216ENST00000514572 RIOX2Q8IUF8 465 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 CMIPQ8IY22 773 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 PLD6Q8N2A8 252 aaKnown RBP6.75□□□□□ -1.33
RFC1-216ENST00000514572 SAMD3Q8N6K7 520 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 TP53INP1Q96A56 240 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 AIFM3Q96NN9 605 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 MS4A5Q9H3V2 200 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 EPB41L1Q9H4G0 881 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 SRPK3Q9UPE1 567 aa6.75□□□□□ -1.33
RFC1-216ENST00000514572 FADS2P1A8MWK0 482 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 NKRFO15226 690 aaKnown RBP eCLIP6.74□□□□□ -1.33
RFC1-216ENST00000514572 ADAM23O75077 832 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 H2AFYO75367 372 aaKnown RBP6.74□□□□□ -1.33
RFC1-216ENST00000514572 GNAT1P11488 350 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 SLC9A1P19634 815 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 LSP1P33241 339 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 CORO7P57737 925 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 SPIRE1Q08AE8 756 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 MOGSQ13724 837 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 GBX1Q14549 363 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 SEC23AQ15436 765 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 HLA-DQA1Q5Y7H0 255 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 CYB5RLQ6IPT4 315 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 CEP68Q76N32 757 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 WAPLQ7Z5K2 1190 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 CREG2Q8IUH2 290 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 TEX2Q8IWB9 1127 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 SHKBP1Q8TBC3 707 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 USP33Q8TEY7 942 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 LINC01599Q8WXQ3 324 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 MAP6Q96JE9 813 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 CHAMP1Q96JM3 812 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 ZDHHC5Q9C0B5 715 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 ANLNQ9NQW6 1124 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.74□□□□□ -1.33
RFC1-216ENST00000514572 TNFRSF10DQ9UBN6 386 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 FBLN5Q9UBX5 448 aa6.74□□□□□ -1.33
RFC1-216ENST00000514572 TMEM265A0A087WTH1 108 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 LTFP02788 710 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 RPL10P27635 214 aaKnown RBP6.73□□□□□ -1.33
RFC1-216ENST00000514572 PURAQ00577 322 aaKnown RBP6.73□□□□□ -1.33
RFC1-216ENST00000514572 HDAC1Q13547 482 aaPredicted RBP6.73□□□□□ -1.33
RFC1-216ENST00000514572 GTF2H3Q13889 308 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 PDCD1Q15116 288 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 EMC4Q5J8M3 183 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms