RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MXRA8Q9BRK3 442 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 MCOLN1Q9GZU1 580 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 HMX1Q9NP08 348 aaPredicted RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 UBIAD1Q9Y5Z9 338 aa8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
HMGXB3-204ENST00000513318 ALPK3Q96L96 1907 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 IGLV3-22A0A075B6J6 115 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 RBM47A0AV96 593 aaKnown RBP8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 POTEMA6NI47 508 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 NKRFO15226 690 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 SEPT4O43236 478 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 RGS20O76081 388 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 ZSCAN22P10073 491 aaPredicted RBP8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 TGFB3P10600 412 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 ITGB5P18084 799 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 CYP3A7P24462 503 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 ICAM3P32942 547 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 RESTQ13127 1097 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 MTMR1Q13613 665 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 LETM2Q2VYF4 491 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 CCDC144BQ3MJ40 725 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 SEPT14Q6ZU15 432 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 FERMT3Q86UX7 667 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 PLA2G4DQ86XP0 818 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 ZNF333Q96JL9 665 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 JADE2Q9NQC1 790 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 RTEL1Q9NZ71 1219 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 FAM184BQ9ULE4 1060 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 MRVI1Q9Y6F6 885 aa8.61□□□□□ -1.03
HMGXB3-204ENST00000513318 FAM86B1E9PN63 330 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 MEIS1O00470 390 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 EDIL3O43854 480 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 CCNT1O60563 726 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 TDP2O95551 362 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 F13A1P00488 732 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 FAM86B2P0C5J1 330 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 TXNP10599 105 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 CNGA1P29973 690 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 CCND3P30281 292 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 DDIT3P35638 169 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 ADCYAP1R1P41586 468 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 NUCB2P80303 420 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 SEMA3FQ13275 785 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 PKP1Q13835 747 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 NBR1Q14596 966 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 Q4G0T1 1027 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 DUSP28Q4G0W2 176 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 PRR16Q569H4 304 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 TTC38Q5R3I4 469 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 PRAMEF19Q5SWL8 479 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 IQSEC1Q6DN90 963 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 GIMAP8Q8ND71 665 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 MBOAT7Q96N66 472 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 IPO9Q96P70 1041 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 SENP7Q9BQF6 1050 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 WDR11Q9BZH6 1224 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 PAK6Q9NQU5 681 aaPredicted RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 PDGFCQ9NRA1 345 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 KCNH7Q9NS40 1196 aa8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 DDX20Q9UHI6 824 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 DDX25Q9UHL0 483 aaKnown RBP8.6□□□□□ -1.03
HMGXB3-204ENST00000513318 BRCA2P51587 3418 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 TBX3O15119 743 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 ADCY6O43306 1168 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 NEMFO60524 1076 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 DUSP11O75319 330 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 ARIH2O95376 493 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 BRD1O95696 1058 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 RARBP10826 455 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 CCL5P13501 91 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 UBA1P22314 1058 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 TNFAIP2Q03169 654 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 NEDD9Q14511 834 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 MTFR1Q15390 333 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 CCDC62Q6P9F0 684 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 CYP2W1Q8TAV3 490 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 LENG9Q96B70 501 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 RNF208Q9H0X6 261 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 AGO4Q9HCK5 861 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 DDX41Q9UJV9 622 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 GNEQ9Y223 722 aaKnown RBP8.59□□□□□ -1.03
HMGXB3-204ENST00000513318 NFASCO94856 1347 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 IPO5O00410 1097 aaKnown RBP8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 LAD1O00515 517 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 WNT7AO00755 349 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 MSH4O15457 936 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 SLC37A4O43826 429 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 GGPS1O95749 300 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 BMP15O95972 392 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms