RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 SPATA31C2B4DYI2 1134 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 STAM2O75886 525 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 IQCF3P0C7M6 154 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 ZNF200P98182 395 aaPredicted RBP13.83□□□□□ -0.2
CDK7-208ENST00000512687 APOBRQ0VD83 1088 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 TIFAQ96CG3 184 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
CDK7-208ENST00000512687 C16orf70Q9BSU1 422 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 PSTPIP2Q9H939 334 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 RBM28Q9NW13 759 aaKnown RBP13.83□□□□□ -0.2
CDK7-208ENST00000512687 NID2Q14112 1375 aa13.83□□□□□ -0.2
CDK7-208ENST00000512687 FIBPO43427 364 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 LGALS2P05162 132 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 GPNMBQ14956 572 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 TRIM71Q2Q1W2 868 aaKnown RBP13.82□□□□□ -0.2
CDK7-208ENST00000512687 GNPTABQ3T906 1256 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 Q6ZUG5 572 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 CYFIP1Q7L576 1253 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 RPUSD2Q8IZ73 545 aaKnown RBP13.82□□□□□ -0.2
CDK7-208ENST00000512687 C7orf31Q8N865 590 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 KATNAL1Q9BW62 490 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 MLXIPQ9HAP2 919 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 NOD1Q9Y239 953 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
CDK7-208ENST00000512687 NLRC5Q86WI3 1866 aa13.82□□□□□ -0.2
CDK7-208ENST00000512687 EVPLQ92817 2033 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 STXBP3O00186 592 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 PPFIA4O75335 1185 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 ITGB5P18084 799 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 RABGGTBP53611 331 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 RBL2Q08999 1139 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 BFSP2Q13515 415 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 TCTN1Q2MV58 587 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 METTL7BQ6UX53 244 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 TRIM50Q86XT4 487 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 PGBD1Q96JS3 809 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 GPR20Q99678 358 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 ZNF576Q9H609 170 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
CDK7-208ENST00000512687 REV3LO60673 3130 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 ZBBXA8MT70 800 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 ADAMTS3O15072 1205 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 ATP9AO75110 1047 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 PFKMP08237 780 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 HMGB1P09429 215 aaKnown RBP13.8□□□□□ -0.2
CDK7-208ENST00000512687 CKBP12277 381 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 MYOGP15173 224 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 KCNA2P16389 499 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 HOXC8P31273 242 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 RFC2P35250 354 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
CDK7-208ENST00000512687 NAPAP54920 295 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 SP4Q02446 784 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 NEDD9Q14511 834 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 XRRA1Q6P2D8 792 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 TRAF7Q6Q0C0 670 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 LRRC8DQ7L1W4 858 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 RETREG2Q8NC44 543 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 SLC17A8Q8NDX2 589 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 CAGE1Q8TC20 777 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 AFAP1L1Q8TED9 768 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 BRF1Q92994 677 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 AGXT2Q9BYV1 514 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 MTIF3Q9H2K0 278 aaKnown RBP13.8□□□□□ -0.2
CDK7-208ENST00000512687 NKX2-4Q9H2Z4 354 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
CDK7-208ENST00000512687 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 V9GY48 417 aaPredicted RBP13.8□□□□□ -0.2
CDK7-208ENST00000512687 ATG2AQ2TAZ0 1938 aa13.8□□□□□ -0.2
CDK7-208ENST00000512687 H3BRB1 525 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 NBNO60934 754 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 NEFLP07196 543 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 SMIM10L2AP0DMW4 78 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 SMIM10L2BP0DMW5 78 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 SELPP16109 830 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 METAP2P50579 478 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDK7-208ENST00000512687 RCAN1P53805 252 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 PTK7Q13308 1070 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 PPP1R18Q6NYC8 613 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 GPRASP2Q96D09 838 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 SENP7Q9BQF6 1050 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 TUT1Q9H6E5 874 aaKnown RBP13.79□□□□□ -0.2
CDK7-208ENST00000512687 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 TMEM260Q9NX78 707 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 PKD2L1Q9P0L9 805 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 SLC4A7Q9Y6M7 1214 aa13.79□□□□□ -0.2
CDK7-208ENST00000512687 SPDYE3A6NKU9 549 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 NOP56O00567 594 aaKnown RBP13.78□□□□□ -0.2
CDK7-208ENST00000512687 REC8O95072 547 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 FOSL2P15408 326 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 CLK2P49760 499 aaKnown RBP13.78□□□□□ -0.2
CDK7-208ENST00000512687 ADCY7P51828 1080 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 MBTPS1Q14703 1052 aa13.78□□□□□ -0.2
CDK7-208ENST00000512687 RAB30Q15771 203 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms