RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SMIM10L2AP0DMW4 78 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 SMIM10L2BP0DMW5 78 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 ADGRF4Q8IZF3 695 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 FBXL6Q8N531 539 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 CPVLQ9H3G5 476 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 HELLSQ9NRZ9 838 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 MICAL3Q7RTP6 2002 aa14.65□□□□□ -0.06
DDX41-215ENST00000512431 NOP56O00567 594 aaKnown RBP14.64□□□□□ -0.07
DDX41-215ENST00000512431 TBX10O75333 385 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 CSPG5O95196 566 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 TGFB3P10600 412 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 ZXDAP98168 799 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 ADAM15Q13444 863 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 CCDC178Q5BJE1 867 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 DGKHQ86XP1 1220 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 ESR2Q92731 530 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 C16orf70Q9BSU1 422 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 RNPEPQ9H4A4 650 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 RNF41Q9H4P4 317 aaPredicted RBP14.64□□□□□ -0.07
DDX41-215ENST00000512431 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 ADGRA3Q8IWK6 1321 aa14.64□□□□□ -0.07
DDX41-215ENST00000512431 RBAK-RBAKDNI3L0D1 243 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 MMP1P03956 469 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 HAND2P61296 217 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 TCF15Q12870 199 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 BTG3Q14201 252 aaPredicted RBP14.63□□□□□ -0.07
DDX41-215ENST00000512431 QRICH1Q2TAL8 776 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 PNMA1Q8ND90 353 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 PLVAPQ9BX97 442 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 KAT14Q9H8E8 782 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
DDX41-215ENST00000512431 MAP3K20Q9NYL2 800 aaKnown RBP14.63□□□□□ -0.07
DDX41-215ENST00000512431 LINC01565O15544 149 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 EYA4O95677 639 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 MX1P20591 662 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 GTF2F1P35269 517 aaKnown RBP eCLIP14.62□□□□□ -0.07
DDX41-215ENST00000512431 MCMDC2Q4G0Z9 681 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 ASPRV1Q53RT3 343 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 IQCA1Q86XH1 822 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 ATOH1Q92858 354 aaPredicted RBP14.62□□□□□ -0.07
DDX41-215ENST00000512431 CLP1Q92989 425 aaKnown RBP14.62□□□□□ -0.07
DDX41-215ENST00000512431 EVI5LQ96CN4 794 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 PDCD2LQ9BRP1 358 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 ZKSCAN3Q9BRR0 538 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 AMNQ9BXJ7 453 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 USP26Q9BXU7 913 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
DDX41-215ENST00000512431 KIAA1217Q5T5P2 1943 aa14.62□□□□□ -0.07
DDX41-215ENST00000512431 RALGAPA2Q2PPJ7 1873 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 LOC730098B7Z3J9 87 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 RGS20O76081 388 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 LGALS2P05162 132 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 UBA1P22314 1058 aaKnown RBP14.61□□□□□ -0.07
DDX41-215ENST00000512431 HOXC8P31273 242 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 HSD17B4P51659 736 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 SIGLEC14Q08ET2 396 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 NAALADL2Q58DX5 795 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 VSIG10LQ86VR7 867 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 SAMD3Q8N6K7 520 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 P2RX5Q93086 422 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 MSLNLQ96KJ4 702 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 ALG13Q9NP73 1137 aaKnown RBP14.61□□□□□ -0.07
DDX41-215ENST00000512431 SETD4Q9NVD3 440 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 FAM86C1Q9NVL1 165 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 ZNF215Q9UL58 517 aaPredicted RBP14.61□□□□□ -0.07
DDX41-215ENST00000512431 PLAGL2Q9UPG8 496 aa14.61□□□□□ -0.07
DDX41-215ENST00000512431 TRIM6-TRIM34B2RNG4 842 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 PARP1P09874 1014 aaKnown RBP14.6□□□□□ -0.07
DDX41-215ENST00000512431 CCND2P30279 289 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 NT5C2P49902 561 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 RRP1P56182 461 aaKnown RBP14.6□□□□□ -0.07
DDX41-215ENST00000512431 ARHGAP4P98171 946 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 SP2Q02086 613 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 COASYQ13057 564 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 PGM5Q15124 567 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 FAM26DQ5JW98 314 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 STOX1Q6ZVD7 989 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 RSPH3Q86UC2 560 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 EFHBQ8N7U6 833 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
DDX41-215ENST00000512431 OSBPL7Q9BZF2 842 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 JMJD4Q9H9V9 463 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 NLRC5Q86WI3 1866 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 ZNF318Q5VUA4 2279 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 ZMYM6O95789 1325 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 C5orf42Q9H799 3197 aa14.6□□□□□ -0.07
DDX41-215ENST00000512431 ENPP3O14638 875 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 ZNF213O14771 459 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 LINC00271P0C7V0 271 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 GHRP10912 638 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 NEDD9Q14511 834 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 CBX2Q14781 532 aaPredicted RBP14.59□□□□□ -0.07
DDX41-215ENST00000512431 GNPTABQ3T906 1256 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 SMRP1Q8NCR6 262 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 PHF7Q9BWX1 381 aaPredicted RBP14.59□□□□□ -0.07
DDX41-215ENST00000512431 RCAN3Q9UKA8 241 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 TRIOO75962 3097 aa14.59□□□□□ -0.07
DDX41-215ENST00000512431 AVPR2P30518 371 aa14.58□□□□□ -0.08
DDX41-215ENST00000512431 NRIP1P48552 1158 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms