RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 A0A1W2PPC1 479 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 A0A1W2PQ45 241 aaPredicted RBP10.04□□□□□ -0.8
PDPN-209ENST00000510906 A0A1W2PQY0 241 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 ASB14A6NK59 587 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 DUSP11O75319 330 aaKnown RBP10.04□□□□□ -0.8
PDPN-209ENST00000510906 PTGS1P23219 599 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 BMP8BP34820 402 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 SLC30A10Q6XR72 485 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 STOX1Q6ZVD7 989 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 EEPD1Q7L9B9 569 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 KLHDC9Q8NEP7 349 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 LAMA2P24043 3122 aaKnown RBP10.04□□□□□ -0.8
PDPN-209ENST00000510906 PLXNA1Q9UIW2 1896 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 WDR19Q8NEZ3 1342 aa10.04□□□□□ -0.8
PDPN-209ENST00000510906 LAMA4Q16363 1823 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 SOX1O00570 391 aaPredicted RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 CALML3P27482 149 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 SCNN1AP37088 669 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 ACLYP53396 1101 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 EPHA4P54764 986 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 GDF10P55107 478 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 TLE2Q04725 743 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 SEC23AQ15436 765 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 KCNA10Q16322 511 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 CDC37Q16543 378 aaPredicted RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 USH1GQ495M9 461 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 ASPRV1Q53RT3 343 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 IFIT1BQ5T764 474 aaKnown RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 C1orf53Q5VUE5 145 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 CCSAPQ6IQ19 270 aaPredicted RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 CYP2U1Q7Z449 544 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 FBXO16Q8IX29 292 aaPredicted RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 ADGRF4Q8IZF3 695 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 UBE2OQ9C0C9 1292 aaKnown RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 UPF3AQ9H1J1 476 aaKnown RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
PDPN-209ENST00000510906 PDGFCQ9NRA1 345 aa10.03□□□□□ -0.8
PDPN-209ENST00000510906 SMCHD1A6NHR9 2005 aa10.02□□□□□ -0.8
PDPN-209ENST00000510906 SOWAHDA6NJG2 315 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 E7EWF7 191 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 CTAGE5O15320 804 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 PARP1P09874 1014 aaKnown RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 CST5P28325 142 aaPredicted RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 SERPINB4P48594 390 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 ALDH5A1P51649 535 aaPredicted RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 GJA9P57773 515 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 RPS6P62753 249 aaKnown RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 TNFAIP2Q03169 654 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 TRDNQ13061 729 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 QRICH1Q2TAL8 776 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 TAPT1Q6NXT6 567 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 RNF207Q6ZRF8 634 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 NOL8Q76FK4 1167 aaKnown RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 CENPQQ7L2Z9 268 aaPredicted RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 CHST3Q7LGC8 479 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 ZNF598Q86UK7 904 aaKnown RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 MORC4Q8TE76 937 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 MAP4K1Q92918 833 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 TSEN34Q9BSV6 310 aaKnown RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 SPC25Q9HBM1 224 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 ETNK1Q9HBU6 452 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 VAT1LQ9HCJ6 419 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 STARD7Q9NQZ5 370 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 PDLIM7Q9NR12 457 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 PRKAG2Q9UGJ0 569 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 RAPGEFL1Q9UHV5 662 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 PNMA2Q9UL42 364 aa10.02□□□□□ -0.81
PDPN-209ENST00000510906 RBM8AQ9Y5S9 174 aaKnown RBP10.02□□□□□ -0.81
PDPN-209ENST00000510906 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 IFIT3O14879 490 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 DHX16O60231 1041 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 PQBP1O60828 265 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 ASGR1P07306 291 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 SMPD1P17405 629 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 ANTXR2P58335 489 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 BEX3Q00994 111 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 GNASQ5JWF2 1037 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 RALYLQ86SE5 291 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 TLK2Q86UE8 772 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 TDHQ8IZJ6 230 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 NCOA7Q8NI08 942 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 TBC1D5Q92609 795 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 HINFPQ9BQA5 517 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 LBHD1Q9BQE6 289 aaPredicted RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 ESYT1Q9BSJ8 1104 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 JMJD4Q9H9V9 463 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 VTA1Q9NP79 307 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 PKD2L1Q9P0L9 805 aa10.01□□□□□ -0.81
PDPN-209ENST00000510906 ADD3Q9UEY8 706 aaKnown RBP10.01□□□□□ -0.81
PDPN-209ENST00000510906 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms