RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 C6orf50Q9HD87 102 aa15.51■□□□□ 0.07
SNF8-206ENST00000509989 TANC1Q9C0D5 1861 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 IGLV3-22A0A075B6J6 115 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 GSTTP1A0A1W2PQM5 241 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 FAM205CA6NFA0 338 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 HAS3O00219 553 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 STAM2O75886 525 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 TGFB3P10600 412 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 NLRP5P59047 1200 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 AP3B2Q13367 1082 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 MTMR1Q13613 665 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 DGKDQ16760 1214 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 GNPTABQ3T906 1256 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 EARS2Q5JPH6 523 aaKnown RBP15.5■□□□□ 0.07
SNF8-206ENST00000509989 XRRA1Q6P2D8 792 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 KCNV1Q6PIU1 500 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 C16orf59Q7L2K0 433 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 TRIM22Q8IYM9 498 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 REXO1Q8N1G1 1221 aaKnown RBP15.5■□□□□ 0.07
SNF8-206ENST00000509989 WNT8BQ93098 351 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 GJA10Q969M2 543 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 UBE2OQ9C0C9 1292 aaKnown RBP15.5■□□□□ 0.07
SNF8-206ENST00000509989 WNT8AQ9H1J5 351 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 KCNH7Q9NS40 1196 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 HDAC6Q9UBN7 1215 aa15.5■□□□□ 0.07
SNF8-206ENST00000509989 GBF1Q92538 1859 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 MEIS1O00470 390 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 F2P00734 622 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 FOSP01100 380 aaPredicted RBP15.49■□□□□ 0.07
SNF8-206ENST00000509989 LGALS2P05162 132 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 RAG1P15918 1043 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 BMP8BP34820 402 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 FXR1P51114 621 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNF8-206ENST00000509989 MFSD10Q14728 455 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 ANKRD1Q15327 319 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 SHHQ15465 462 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 KIAA0753Q2KHM9 967 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 UTP14CQ5TAP6 766 aaKnown RBP15.49■□□□□ 0.07
SNF8-206ENST00000509989 METTL7BQ6UX53 244 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 NLRX1Q86UT6 975 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 CCDC83Q8IWF9 413 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 DHX38Q92620 1227 aaKnown RBP15.49■□□□□ 0.07
SNF8-206ENST00000509989 PCYT2Q99447 389 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 NOC4LQ9BVI4 516 aaKnown RBP15.49■□□□□ 0.07
SNF8-206ENST00000509989 SH3GLB2Q9NR46 395 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 ORC3Q9UBD5 711 aaPredicted RBP15.49■□□□□ 0.07
SNF8-206ENST00000509989 PRKAG2Q9UGJ0 569 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 LAMA3Q16787 3333 aa15.49■□□□□ 0.07
SNF8-206ENST00000509989 STK36Q9NRP7 1315 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 SIP14410 1827 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 DDX39AO00148 427 aaKnown RBP15.48■□□□□ 0.07
SNF8-206ENST00000509989 TIMP1P01033 207 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 ACRP10323 421 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 CCL23P55773 120 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 NEDD9Q14511 834 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 CEP55Q53EZ4 464 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 BRDTQ58F21 947 aaPredicted RBP15.48■□□□□ 0.07
SNF8-206ENST00000509989 LENG9Q96B70 501 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 SCLYQ96I15 445 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 LRCH3Q96II8 777 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 PHF20Q9BVI0 1012 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 AGO4Q9HCK5 861 aaKnown RBP15.48■□□□□ 0.07
SNF8-206ENST00000509989 LOXHD1Q8IVV2 1947 aa15.48■□□□□ 0.07
SNF8-206ENST00000509989 MYH9P35579 1960 aaKnown RBP15.47■□□□□ 0.07
SNF8-206ENST00000509989 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 PTPRSQ13332 1948 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 LAMA2P24043 3122 aaKnown RBP15.47■□□□□ 0.07
SNF8-206ENST00000509989 SZT2Q5T011 3432 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 DHX15O43143 795 aaKnown RBP15.47■□□□□ 0.07
SNF8-206ENST00000509989 KPNA6O60684 536 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 PPFIA4O75335 1185 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 CCNE2O96020 404 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 CYP3A4P08684 503 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 CSF2RAP15509 400 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 NFRKBQ6P4R8 1299 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 BLIDQ8IZY5 108 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 CCDC148Q8NFR7 591 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 CCDC12Q8WUD4 166 aaPredicted RBP15.47■□□□□ 0.07
SNF8-206ENST00000509989 ZBTB10Q96DT7 871 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 LBHD1Q9BQE6 289 aaPredicted RBP15.47■□□□□ 0.07
SNF8-206ENST00000509989 SENP7Q9BQF6 1050 aa15.47■□□□□ 0.07
SNF8-206ENST00000509989 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.07
SNF8-206ENST00000509989 TDP2O95551 362 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 GNA11P29992 359 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 TCF7P36402 384 aaPredicted RBP15.46■□□□□ 0.07
SNF8-206ENST00000509989 ZNF76P36508 570 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
SNF8-206ENST00000509989 DAGLBQ8NCG7 672 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 TBCKQ8TEA7 893 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 TBC1D32Q96NH3 1257 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 OSBPL7Q9BZF2 842 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 GLT8D2Q9H1C3 349 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 HIPK3Q9H422 1215 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 RNPEPQ9H4A4 650 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 EHMT1Q9H9B1 1298 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 LIMCH1Q9UPQ0 1083 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 EVPLQ92817 2033 aa15.46■□□□□ 0.07
SNF8-206ENST00000509989 H3BRB1 525 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms