RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 WDR5P61964 334 aaKnown RBP16.8■□□□□ 0.28
HMGCL-208ENST00000509389 MRPS5P82675 430 aaKnown RBP16.8■□□□□ 0.28
HMGCL-208ENST00000509389 ZNF200P98182 395 aaPredicted RBP16.8■□□□□ 0.28
HMGCL-208ENST00000509389 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
HMGCL-208ENST00000509389 TAP1Q03518 808 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 HIC1Q14526 733 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 PIBF1Q8WXW3 757 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 WNT8BQ93098 351 aa16.8■□□□□ 0.28
HMGCL-208ENST00000509389 TRANK1O15050 2925 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 CPA1P15085 419 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 POU3F3P20264 500 aaPredicted RBP16.79■□□□□ 0.28
HMGCL-208ENST00000509389 DDIT3P35638 169 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 AK2P54819 239 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 MRPS9P82933 396 aaKnown RBP16.79■□□□□ 0.28
HMGCL-208ENST00000509389 CUL4AQ13619 759 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 TCTN1Q2MV58 587 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 CNKSR3Q6P9H4 555 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 TRAF7Q6Q0C0 670 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 DOCK5Q9H7D0 1870 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 NCOR1O75376 2440 aa16.79■□□□□ 0.28
HMGCL-208ENST00000509389 FRMPD4Q14CM0 1322 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 RBAK-RBAKDNI3L0D1 243 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 TLL1O43897 1013 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 DEFB103AP81534 67 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 TOB2Q14106 344 aaPredicted RBP16.78■□□□□ 0.28
HMGCL-208ENST00000509389 ZNF618Q5T7W0 954 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
HMGCL-208ENST00000509389 TMCO2Q7Z6W1 182 aaPredicted RBP16.78■□□□□ 0.28
HMGCL-208ENST00000509389 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 ARNTL2Q8WYA1 636 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 MAP3K14Q99558 947 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 MYL10Q9BUA6 226 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 LY9Q9HBG7 655 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 PDRG1Q9NUG6 133 aa16.78■□□□□ 0.28
HMGCL-208ENST00000509389 TNFRSF10AO00220 468 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 ICAM3P32942 547 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 EVCP57679 992 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 MBTPS1Q14703 1052 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 GNPTABQ3T906 1256 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 SPRED2Q7Z698 418 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 INPP4AQ96PE3 977 aaPredicted RBP16.77■□□□□ 0.28
HMGCL-208ENST00000509389 SPZ1Q9BXG8 430 aa16.77■□□□□ 0.28
HMGCL-208ENST00000509389 TSPYL2Q9H2G4 693 aaPredicted RBP16.77■□□□□ 0.28
HMGCL-208ENST00000509389 ABHD14A-ACY1A0A1B0GW23 586 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 LCHNA4D1U4 455 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 H3BRB1 525 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 PRC1O43663 620 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.27
HMGCL-208ENST00000509389 STAM2O75886 525 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 DDAH1O94760 285 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 LGALS2P05162 132 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 SEMA3FQ13275 785 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 ANKRD1Q15327 319 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 KRT40Q6A162 431 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 SERINC5Q86VE9 423 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 CTCFLQ8NI51 663 aaPredicted RBP16.77■□□□□ 0.27
HMGCL-208ENST00000509389 RRP36Q96EU6 259 aaKnown RBP16.77■□□□□ 0.27
HMGCL-208ENST00000509389 TMX3Q96JJ7 454 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 MTA3Q9BTC8 594 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 ZBED2Q9BTP6 218 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 TUT1Q9H6E5 874 aaKnown RBP16.77■□□□□ 0.27
HMGCL-208ENST00000509389 RTEL1Q9NZ71 1219 aa16.77■□□□□ 0.27
HMGCL-208ENST00000509389 REV3LO60673 3130 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 C17orf102A2RUQ5 167 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 SMARCA1P28370 1054 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 HOXC8P31273 242 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 KIF5BP33176 963 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 IKBKEQ14164 716 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 USP17L6PQ6QN14 398 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 ADAMTS19Q8TE59 1207 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
HMGCL-208ENST00000509389 TCF20Q9UGU0 1960 aaKnown RBP16.76■□□□□ 0.27
HMGCL-208ENST00000509389 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
HMGCL-208ENST00000509389 NOP56O00567 594 aaKnown RBP16.75■□□□□ 0.27
HMGCL-208ENST00000509389 SH2B2O14492 632 aaPredicted RBP16.75■□□□□ 0.27
HMGCL-208ENST00000509389 MEIS2O14770 477 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 FIBPO43427 364 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 EFCAB14O75071 495 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 LGR5O75473 907 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 SMIM10L2AP0DMW4 78 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 SMIM10L2BP0DMW5 78 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 MCM5P33992 734 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 THPOP40225 353 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 GRB10Q13322 594 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 NEDD9Q14511 834 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 SKIV2LQ15477 1246 aaKnown RBP16.75■□□□□ 0.27
HMGCL-208ENST00000509389 METTL7BQ6UX53 244 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 CYFIP1Q7L576 1253 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 CUL5Q93034 780 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 ATP6V0A1Q93050 837 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 INTS4Q96HW7 963 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms