RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 GJC2Q5T442 439 aaPredicted RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 LRCH2Q5VUJ6 765 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 METTL7BQ6UX53 244 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 RNF180Q86T96 592 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 ARRDC4Q8NCT1 418 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 LENG1Q96BZ8 264 aaPredicted RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 RIT2Q99578 217 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 TEKT3Q9BXF9 490 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 JPH1Q9HDC5 661 aaPredicted RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.77■□□□□ 0.28
RNF4-213ENST00000509388 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
RNF4-213ENST00000509388 NFASCO94856 1347 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 LAD1O00515 517 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 WNT7AO00755 349 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 ZEB2O60315 1214 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 GJB1P08034 283 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 OR52Z1P0C646 297 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 TXKP42681 527 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 CPT1AP50416 773 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 CEBPZQ03701 1054 aaKnown RBP16.76■□□□□ 0.27
RNF4-213ENST00000509388 PTGDRQ13258 359 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 ITGB3BPQ13352 177 aaPredicted RBP16.76■□□□□ 0.27
RNF4-213ENST00000509388 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
RNF4-213ENST00000509388 LHX8Q68G74 356 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 ETNPPLQ8TBG4 499 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 SLC5A5Q92911 643 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 KCNMB3Q9NPA1 279 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 SLC9A2Q9UBY0 812 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 PCDHA12Q9UN75 941 aa16.76■□□□□ 0.27
RNF4-213ENST00000509388 ADCY6O43306 1168 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 FARP2O94887 1054 aaPredicted RBP16.75■□□□□ 0.27
RNF4-213ENST00000509388 SGPL1O95470 568 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 PGK1P00558 417 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 NCLP19338 710 aaKnown RBP16.75■□□□□ 0.27
RNF4-213ENST00000509388 GJA9P57773 515 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 KRT76Q01546 638 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 ARHGAP1Q07960 439 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 TMEM266Q2M3C6 531 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 GNASQ5JWF2 1037 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 ATL3Q6DD88 541 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 TNS4Q8IZW8 715 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 U2AF1L4Q8WU68 220 aaKnown RBP16.75■□□□□ 0.27
RNF4-213ENST00000509388 AFG1LQ8WV93 481 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 EMID1Q96A84 441 aaPredicted RBP16.75■□□□□ 0.27
RNF4-213ENST00000509388 SAMM50Q9Y512 469 aa16.75■□□□□ 0.27
RNF4-213ENST00000509388 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 CHMP2AO43633 222 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 PTGS1P23219 599 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 STK38Q15208 465 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 FSCN1Q16658 493 aaKnown RBP16.74■□□□□ 0.27
RNF4-213ENST00000509388 DTHD1Q6ZMT9 781 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 PCSK9Q8NBP7 692 aaKnown RBP16.74■□□□□ 0.27
RNF4-213ENST00000509388 PPTC7Q8NI37 304 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 SEPT1Q8WYJ6 367 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 HAS1Q92839 578 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 GJA10Q969M2 543 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 MTMR9Q96QG7 549 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 TMEM60Q9H2L4 133 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 TTC12Q9H892 705 aaPredicted RBP16.74■□□□□ 0.27
RNF4-213ENST00000509388 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
RNF4-213ENST00000509388 CLIC4Q9Y696 253 aa16.74■□□□□ 0.27
RNF4-213ENST00000509388 KBTBD13C9JR72 458 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
RNF4-213ENST00000509388 CAPN2P17655 700 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 KRT85P78386 507 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 BEX3Q00994 111 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 DNM1Q05193 864 aaKnown RBP16.73■□□□□ 0.27
RNF4-213ENST00000509388 DGKDQ16760 1214 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 HSDL1Q3SXM5 330 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 ZNF746Q6NUN9 644 aaPredicted RBP16.73■□□□□ 0.27
RNF4-213ENST00000509388 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 RAB34Q9BZG1 259 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
RNF4-213ENST00000509388 BCAS3Q9H6U6 928 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 POLR3EQ9NVU0 708 aa16.73■□□□□ 0.27
RNF4-213ENST00000509388 MCM3APO60318 1980 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 A6NJR5 290 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 WDR64B1ANS9 1081 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 KPNA6O60684 536 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 ADAMTS4O75173 837 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 PPFIA4O75335 1185 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 PSMD10O75832 226 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 MMP3P08254 477 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 MYL3P08590 195 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 SFNP31947 248 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 TECP42680 631 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 GJA8P48165 433 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 JAK3P52333 1124 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 ACTR2P61160 394 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 ATP2C1P98194 919 aaPredicted RBP16.72■□□□□ 0.27
RNF4-213ENST00000509388 NCAPH2Q6IBW4 605 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 MIS18BP1Q6P0N0 1132 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 MIER3Q7Z3K6 550 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 SMAP1Q8IYB5 467 aaPredicted RBP16.72■□□□□ 0.27
RNF4-213ENST00000509388 C4orf32Q8N8J7 132 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 GPR20Q99678 358 aa16.72■□□□□ 0.27
RNF4-213ENST00000509388 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms