RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 FUT2Q10981 343 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 LAMC2Q13753 1193 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 CELF3Q5SZQ8 465 aaKnown RBP12.59□□□□□ -0.39
RNF4-212ENST00000509258 TYW1BQ6NUM6 668 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 CNKSR3Q6P9H4 555 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 KCNV1Q6PIU1 500 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 CTCFLQ8NI51 663 aaPredicted RBP12.59□□□□□ -0.39
RNF4-212ENST00000509258 ALG1Q9BT22 464 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
RNF4-212ENST00000509258 FAM217BQ9NTX9 383 aaPredicted RBP12.59□□□□□ -0.39
RNF4-212ENST00000509258 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 ADAMTS3O15072 1205 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 EFCAB14O75071 495 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 CDC45O75419 566 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 CXCL10P02778 98 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 CKBP12277 381 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 KCNQ1P51787 676 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 GRB10Q13322 594 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 MFSD10Q14728 455 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 UBE2SQ16763 222 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 RRP36Q96EU6 259 aaKnown RBP12.58□□□□□ -0.4
RNF4-212ENST00000509258 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.4
RNF4-212ENST00000509258 C16orf70Q9BSU1 422 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 ZBED2Q9BTP6 218 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.4
RNF4-212ENST00000509258 ABHD14A-ACY1A0A1B0GW23 586 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 GJB5O95377 273 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 SMARCA1P28370 1054 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 CCND2P30279 289 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 PTK7Q13308 1070 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 KIAA0753Q2KHM9 967 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 TRIM71Q2Q1W2 868 aaKnown RBP12.57□□□□□ -0.4
RNF4-212ENST00000509258 KRT40Q6A162 431 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 APOA5Q6Q788 366 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
RNF4-212ENST00000509258 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 HLA-CQ95604 372 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 SPATA33Q96N06 139 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 INPP4AQ96PE3 977 aaPredicted RBP12.57□□□□□ -0.4
RNF4-212ENST00000509258 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 C1QTNF1Q9BXJ1 281 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 OSBPL7Q9BZF2 842 aa12.57□□□□□ -0.4
RNF4-212ENST00000509258 EVPLQ92817 2033 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 LCHNA4D1U4 455 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 SPATA31C2B4DYI2 1134 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 LPXNO60711 386 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 NBNO60934 754 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 ATP9AO75110 1047 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 CDC27P30260 824 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 ICAM3P32942 547 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 KIF5BP33176 963 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 DEFB103AP81534 67 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 MBTPS1Q14703 1052 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 SPRED2Q7Z698 418 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 TMCO2Q7Z6W1 182 aaPredicted RBP12.56□□□□□ -0.4
RNF4-212ENST00000509258 TRIM50Q86XT4 487 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 KCNB2Q92953 911 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 RAD9AQ99638 391 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 LMCD1Q9NZU5 365 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 SLC12A7Q9Y666 1083 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 BRWD1Q9NSI6 2320 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 ATG2AQ2TAZ0 1938 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
RNF4-212ENST00000509258 PPFIA4O75335 1185 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 TGFB3P10600 412 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 IKBKEQ14164 716 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 GNPTABQ3T906 1256 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
RNF4-212ENST00000509258 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 GDPD5Q8WTR4 605 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 LZTS2Q9BRK4 669 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 SNX14Q9Y5W7 946 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 MYH9P35579 1960 aaKnown RBP12.55□□□□□ -0.4
RNF4-212ENST00000509258 NLRC5Q86WI3 1866 aa12.55□□□□□ -0.4
RNF4-212ENST00000509258 LGR5O75473 907 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 STAM2O75886 525 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 LGALS2P05162 132 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 ITGB5P18084 799 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 HOXC8P31273 242 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 GNAQP50148 359 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 ZNF618Q5T7W0 954 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 PCNX4Q63HM2 1172 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 SMARCC2Q8TAQ2 1214 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
RNF4-212ENST00000509258 GPR20Q99678 358 aa12.54□□□□□ -0.4
RNF4-212ENST00000509258 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
RNF4-212ENST00000509258 TCF20Q9UGU0 1960 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms