RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PEX2P28328 305 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 CD86P42081 329 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 RRP12Q5JTH9 1297 aaKnown RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 TXNDC11Q6PKC3 985 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 BTN2A1Q7KYR7 527 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 STK11IPQ8N1F8 1099 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 GPBAR1Q8TDU6 330 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 DIS3LQ8TF46 1054 aaKnown RBP6.02□□□□□ -1.45
NIPBL-204ENST00000504430 ISCA1Q9BUE6 129 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 GRIP2Q9C0E4 1043 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 ZSWIM5Q9P217 1185 aa6.02□□□□□ -1.45
NIPBL-204ENST00000504430 MPHOSPH10O00566 681 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 ALDH1A1P00352 501 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 MAPK10P53779 464 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PPFIA1Q13136 1202 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 TRIM29Q14134 588 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 SLMAPQ14BN4 828 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 SURF1Q15526 300 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PKDCCQ504Y2 493 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PARP10Q53GL7 1025 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 KAZNQ674X7 775 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 DENND5AQ6IQ26 1287 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PDZD3Q86UT5 571 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 TMEM145Q8NBT3 493 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 JAKMIP1Q96N16 626 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 IWS1Q96ST2 819 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 CYP8B1Q9UNU6 501 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 A0A087WV62 115 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 DOK2O60496 412 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 KCNH1O95259 989 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PAPLNO95428 1278 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 HSD3B1P14060 373 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 ATP2A2P16615 1042 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 TNFSF4P23510 183 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 CAP2P40123 477 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 GJC2Q5T442 439 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 USP53Q70EK8 1073 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 HDAC2Q92769 488 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 RRP36Q96EU6 259 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 WDR89Q96FK6 387 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 CFAP53Q96M91 514 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 SORBS1Q9BX66 1292 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 LACRTQ9GZZ8 138 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 CERS4Q9HA82 394 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 GJD2Q9UKL4 321 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 RASA4BC9J798 803 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 TRAF5O00463 557 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 TADA3O75528 432 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 EGFRP00533 1210 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 HNRNPCP07910 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 KCNJ6P48051 423 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PTPN5P54829 565 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 NR1H2P55055 460 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 GUCY1A3Q02108 690 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PDCD1Q15116 288 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 LILRA6Q6PI73 481 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 JADE3Q92613 823 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 AIFM3Q96NN9 605 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 SDF4Q9BRK5 362 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 TTLL2Q9BWV7 592 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 RNF38Q9H0F5 515 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 EPN3Q9H201 632 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 VPS33BQ9H267 617 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 CLEC4MQ9H2X3 399 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 AGO4Q9HCK5 861 aaKnown RBP6.01□□□□□ -1.45
NIPBL-204ENST00000504430 GJB4Q9NTQ9 266 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 PDRG1Q9NUG6 133 aa6.01□□□□□ -1.45
NIPBL-204ENST00000504430 B4E171 279 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 PDE2AO00408 941 aaPredicted RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 GJB3O75712 270 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 MAN2A2P49641 1150 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 NR5A1Q13285 461 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 CPLX2Q6PUV4 134 aaKnown RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 IQCA1Q86XH1 822 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 N4BP2L2Q92802 583 aaPredicted RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 TRIM63Q969Q1 353 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 B3GNT5Q9BYG0 378 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 COMMD8Q9NX08 183 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 TRMT1Q9NXH9 659 aaKnown RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 KCNK3O14649 394 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 HSPA4LO95757 839 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 ALDH2P05091 517 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 FGFR1P11362 822 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 CASQ1P31415 396 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 UBXN2AP68543 259 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 VWA3BQ502W6 1294 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 BHLHE41Q9C0J9 482 aaPredicted RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 ARHGAP28Q9P2N2 729 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 SPEF1Q9Y4P9 236 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 PARP1P09874 1014 aaKnown RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 ATP6V1E1P36543 226 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 TNNT3P45378 269 aaPredicted RBP6□□□□□ -1.45
NIPBL-204ENST00000504430 POSTNQ15063 836 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 HIF1AQ16665 826 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 ARMC4Q5T2S8 1044 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 MENTQ9BUN1 341 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 FBXL5Q9UKA1 691 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 PCDHA11Q9Y5I1 949 aa6□□□□□ -1.45
NIPBL-204ENST00000504430 TACC3Q9Y6A5 838 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms