RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 RNF135Q8IUD6 432 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 TMEM47Q9BQJ4 181 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 CPVLQ9H3G5 476 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 RNF146Q9NTX7 359 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
PUDP-205ENST00000498474 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
PUDP-205ENST00000498474 NEDD4P46934 1319 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 TRIM43BA6NCK2 446 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 ORC4O43929 436 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 ADAMTS4O75173 837 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 FGRP09769 529 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 ITGB8P26012 769 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 COPB2P35606 906 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 USP4Q13107 963 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 ACVR2BQ13705 512 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 ARMCX2Q7L311 632 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 CCDC144CPQ8IYA2 1237 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 TDHQ8IZJ6 230 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 CHST13Q8NET6 341 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 CHURC1Q8WUH1 139 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 TRIM43Q96BQ3 446 aaPredicted RBP9.36□□□□□ -0.91
PUDP-205ENST00000498474 A1CFQ9NQ94 594 aaKnown RBP9.36□□□□□ -0.91
PUDP-205ENST00000498474 CNPY2Q9Y2B0 182 aa9.36□□□□□ -0.91
PUDP-205ENST00000498474 LAMA4Q16363 1823 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 ASTN1O14525 1302 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 SYNRGQ9UMZ2 1314 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 MYH6P13533 1939 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 A0A1W2PQ45 241 aaPredicted RBP9.35□□□□□ -0.91
PUDP-205ENST00000498474 A0A1W2PQY0 241 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 AKR1A1P14550 325 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 MSX1P28360 303 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 ABL2P42684 1182 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 NOVP48745 357 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 TLE2Q04725 743 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 KCNA10Q16322 511 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 CCDC144BQ3MJ40 725 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 GNASQ5JWF2 1037 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 MAMDC4Q6UXC1 1216 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 MFSD6Q6ZSS7 791 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 EEPD1Q7L9B9 569 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 FAM160B2Q86V87 743 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 BADQ92934 168 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 PDLIM7Q9NR12 457 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 CCPG1Q9ULG6 757 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 PHF24Q9UPV7 400 aa9.35□□□□□ -0.91
PUDP-205ENST00000498474 BAZ2BQ9UIF8 2168 aaKnown RBP9.34□□□□□ -0.91
PUDP-205ENST00000498474 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 LRRC37A2A6NM11 1700 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 A0A1W2PPC1 479 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 B4E1Z4 1266 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 NFIBO00712 420 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 PQBP1O60828 265 aaKnown RBP9.34□□□□□ -0.91
PUDP-205ENST00000498474 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 TOP1P11387 765 aaKnown RBP9.34□□□□□ -0.91
PUDP-205ENST00000498474 GSPT1P15170 499 aaKnown RBP9.34□□□□□ -0.91
PUDP-205ENST00000498474 OAZ1P54368 228 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 BEX3Q00994 111 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 SNX17Q15036 470 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 C9orf50Q5SZB4 431 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 SYDE2Q5VT97 1194 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 NSMFQ6X4W1 530 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 C1orf229Q6ZS94 237 aaPredicted RBP9.34□□□□□ -0.91
PUDP-205ENST00000498474 RNF180Q86T96 592 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 FAM133AQ8N9E0 248 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 KLHDC9Q8NEP7 349 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 DCAF4Q8WV16 495 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 LBHD1Q9BQE6 289 aaPredicted RBP9.34□□□□□ -0.91
PUDP-205ENST00000498474 KATNBL1Q9H079 304 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 PDGFCQ9NRA1 345 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 NRBP1Q9UHY1 535 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 SYNPO2Q9UMS6 1093 aa9.34□□□□□ -0.91
PUDP-205ENST00000498474 RBAK-RBAKDNI3L0D1 243 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 ZNF213O14771 459 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 OIP5O43482 229 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 PLA2G6O60733 806 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 C6orf222P0C671 652 aaPredicted RBP9.33□□□□□ -0.92
PUDP-205ENST00000498474 PDHBP11177 359 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 ACLYP53396 1101 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 AAMPQ13685 434 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 BAATQ14032 418 aaPredicted RBP9.33□□□□□ -0.92
PUDP-205ENST00000498474 TLR1Q15399 786 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 SHHQ15465 462 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
PUDP-205ENST00000498474 FBXO16Q8IX29 292 aaPredicted RBP9.33□□□□□ -0.92
PUDP-205ENST00000498474 VTI1AQ96AJ9 217 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 FAM161BQ96MY7 647 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 OXCT2Q9BYC2 517 aaPredicted RBP9.33□□□□□ -0.92
PUDP-205ENST00000498474 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 RANBP17Q9H2T7 1088 aaKnown RBP9.33□□□□□ -0.92
PUDP-205ENST00000498474 ABHD16BQ9H3Z7 469 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 TCP11L1Q9NUJ3 509 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 CYP39A1Q9NYL5 469 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
PUDP-205ENST00000498474 FBXO40Q9UH90 709 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms