RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 HYAL1Q12794 435 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 SMAD4Q13485 552 aaKnown RBP13.59□□□□□ -0.23
CDK9-205ENST00000498339 COL19A1Q14993 1142 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 CELF3Q5SZQ8 465 aaKnown RBP13.59□□□□□ -0.23
CDK9-205ENST00000498339 MYSM1Q5VVJ2 828 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 KCNV1Q6PIU1 500 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 PRSS33Q8NF86 280 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 ESR2Q92731 530 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 APBB2Q92870 758 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 RNF41Q9H4P4 317 aaPredicted RBP13.59□□□□□ -0.23
CDK9-205ENST00000498339 CD207Q9UJ71 328 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 RWDD3Q9Y3V2 267 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 NEDD4P46934 1319 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 ADGRA3Q8IWK6 1321 aa13.59□□□□□ -0.23
CDK9-205ENST00000498339 A0A0D9SFI3 127 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 H3BRB1 525 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 GRM6O15303 877 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 TBX10O75333 385 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
CDK9-205ENST00000498339 UBA1P22314 1058 aaKnown RBP13.58□□□□□ -0.24
CDK9-205ENST00000498339 LTBRP36941 435 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 ASPRV1Q53RT3 343 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 IQCA1Q86XH1 822 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 EDAQ92838 391 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 PBXIP1Q96AQ6 731 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 LMAN2LQ9H0V9 348 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.24
CDK9-205ENST00000498339 CFAP54Q96N23 3096 aa13.58□□□□□ -0.24
CDK9-205ENST00000498339 TMEM221A6NGB7 291 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 M0R296 226 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 ST18O60284 1047 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 CAND2O75155 1236 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 LGALS2P05162 132 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 RB1P06400 928 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 GNAT1P11488 350 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
CDK9-205ENST00000498339 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDK9-205ENST00000498339 PPP2R3CQ969Q6 453 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 PRRX2Q99811 253 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 PDCD2LQ9BRP1 358 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 C16orf70Q9BSU1 422 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
CDK9-205ENST00000498339 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 LINC01565O15544 149 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
CDK9-205ENST00000498339 CCND2P30279 289 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
CDK9-205ENST00000498339 BMPR1AP36894 532 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 ARHGAP4P98171 946 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 BTG3Q14201 252 aaPredicted RBP13.56□□□□□ -0.24
CDK9-205ENST00000498339 PGM5Q15124 567 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 CTC1Q2NKJ3 1217 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 IER5LQ5T953 404 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
CDK9-205ENST00000498339 DGKHQ86XP1 1220 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
CDK9-205ENST00000498339 AMNQ9BXJ7 453 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 OSBPL7Q9BZF2 842 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 PLXNA4Q9HCM2 1894 aa13.56□□□□□ -0.24
CDK9-205ENST00000498339 GFRA3O60609 400 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 RGS20O76081 388 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 MMP1P03956 469 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 GHRP10912 638 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 HSD17B4P51659 736 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 NMIQ13287 307 aaPredicted RBP13.55□□□□□ -0.24
CDK9-205ENST00000498339 CCDC178Q5BJE1 867 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 TRIM67Q6ZTA4 783 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 IL31RAQ8NI17 732 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
CDK9-205ENST00000498339 RNPEPQ9H4A4 650 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 JMJD4Q9H9V9 463 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 ALG13Q9NP73 1137 aaKnown RBP13.55□□□□□ -0.24
CDK9-205ENST00000498339 SETD4Q9NVD3 440 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 FAM86C1Q9NVL1 165 aa13.55□□□□□ -0.24
CDK9-205ENST00000498339 ZNF215Q9UL58 517 aaPredicted RBP13.55□□□□□ -0.24
CDK9-205ENST00000498339 ZNF213O14771 459 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 KDM4AO75164 1064 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 SP2Q02086 613 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 SP4Q02446 784 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 PKN1Q16512 942 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 UTP14CQ5TAP6 766 aaKnown RBP13.54□□□□□ -0.24
CDK9-205ENST00000498339 FCHSD1Q86WN1 690 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 HOMER1Q86YM7 354 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 TTC3P53804 2025 aa13.54□□□□□ -0.24
CDK9-205ENST00000498339 B4E1Z4 1266 aa13.53□□□□□ -0.24
CDK9-205ENST00000498339 TGFB3P10600 412 aa13.53□□□□□ -0.24
CDK9-205ENST00000498339 HOXC8P31273 242 aa13.53□□□□□ -0.24
CDK9-205ENST00000498339 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
CDK9-205ENST00000498339 BMP8AQ7Z5Y6 402 aa13.53□□□□□ -0.24
CDK9-205ENST00000498339 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
CDK9-205ENST00000498339 USP26Q9BXU7 913 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms