RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 GORASP1Q9BQQ3 440 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 TMEM260Q9NX78 707 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 DSEQ9UL01 958 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 FFAR3O14843 346 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 PLD2O14939 933 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 SRGAP2CP0DJJ0 459 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 NKX3-2P78367 333 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 VMACQ2NL98 169 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 VWA3BQ502W6 1294 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 SPOCD1Q6ZMY3 1216 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 BRAPQ7Z569 592 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 ZC3H7AQ8IWR0 971 aaKnown RBP7.24□□□□□ -1.25
SNX13-211ENST00000496855 RBM12BQ8IXT5 1001 aaKnown RBP7.24□□□□□ -1.25
SNX13-211ENST00000496855 LINC00482Q8N8I6 264 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 TTLL11Q8NHH1 800 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 CLEC4DQ8WXI8 215 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 SCLYQ96I15 445 aa7.24□□□□□ -1.25
SNX13-211ENST00000496855 RNPC3Q96LT9 517 aaKnown RBP7.24□□□□□ -1.25
SNX13-211ENST00000496855 RASGRP1O95267 797 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 RAPGEF3O95398 923 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 LRG1P02750 347 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 APPP05067 770 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 PYGMP11217 842 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 TUSC3Q13454 348 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 TEPPQ6URK8 271 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 C16orf59Q7L2K0 433 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 SAPCD2Q86UD0 394 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 LINC01356Q8N9X3 169 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 ZBTB8AQ96BR9 441 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 C11orf84Q9BUA3 381 aaPredicted RBP7.23□□□□□ -1.25
SNX13-211ENST00000496855 PDGFDQ9GZP0 370 aaPredicted RBP7.23□□□□□ -1.25
SNX13-211ENST00000496855 TRIM39Q9HCM9 518 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 CATSPERZQ9NTU4 200 aa7.23□□□□□ -1.25
SNX13-211ENST00000496855 TCRBV5S4A2TA0A5A2 114 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 GSTA4O15217 222 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 LTFP02788 710 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 ST5P78524 1137 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 DLX2Q07687 328 aaPredicted RBP7.22□□□□□ -1.25
SNX13-211ENST00000496855 GPR19Q15760 415 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 FAM47CQ5HY64 1035 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 KCTD1Q719H9 257 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 FGD2Q7Z6J4 655 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 SH3RF2Q8TEC5 729 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 HSPBP1Q9NZL4 362 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 CBLCQ9ULV8 474 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 TELO2Q9Y4R8 837 aa7.22□□□□□ -1.25
SNX13-211ENST00000496855 TCRBV16S1A1N1A0A5B0 115 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 ESYT3A0FGR9 886 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 CCDC66A2RUB6 948 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 PDE6AP16499 860 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 EPHA5P54756 1037 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 ITGA1P56199 1179 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 GRIN1Q05586 938 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
SNX13-211ENST00000496855 FNDC3BQ53EP0 1204 aaKnown RBP7.21□□□□□ -1.26
SNX13-211ENST00000496855 ARHGAP36Q6ZRI8 547 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.21□□□□□ -1.26
SNX13-211ENST00000496855 KYQ8NBH2 561 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 TP53I13Q8NBR0 393 aaPredicted RBP7.21□□□□□ -1.26
SNX13-211ENST00000496855 ZNF526Q8TF50 670 aaPredicted RBP7.21□□□□□ -1.26
SNX13-211ENST00000496855 CLUHP3Q96NS8 147 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 CD244Q9BZW8 370 aa7.21□□□□□ -1.26
SNX13-211ENST00000496855 SH3D21A4FU49 640 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 PPP1R12AO14974 1030 aaPredicted RBP7.2□□□□□ -1.26
SNX13-211ENST00000496855 CKMP06732 381 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 DNM2P50570 870 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 CRY1Q16526 586 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 STK32CQ86UX6 486 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 OSTM1Q86WC4 334 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 SPATA6Q9NWH7 488 aaPredicted RBP7.2□□□□□ -1.26
SNX13-211ENST00000496855 SRPK3Q9UPE1 567 aa7.2□□□□□ -1.26
SNX13-211ENST00000496855 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
SNX13-211ENST00000496855 TRIM13O60858 407 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 ASMTLO95671 621 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 AMY2AP04746 511 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 AMY2BP19961 511 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 PAN2Q504Q3 1202 aaKnown RBP7.19□□□□□ -1.26
SNX13-211ENST00000496855 HOMER1Q86YM7 354 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 ADGRG2Q8IZP9 1017 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 NLGN4XQ8N0W4 816 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 CELF4Q9BZC1 486 aaKnown RBP7.19□□□□□ -1.26
SNX13-211ENST00000496855 COQ6Q9Y2Z9 468 aa7.19□□□□□ -1.26
SNX13-211ENST00000496855 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 MAN2B1O00754 1011 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 FAHP16930 419 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 KCNA6P17658 529 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 BMP7P18075 431 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 KRT15P19012 456 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 THBS2P35442 1172 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 JAM2P57087 298 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 LACTBP83111 547 aaPredicted RBP7.18□□□□□ -1.26
SNX13-211ENST00000496855 ADAM9Q13443 819 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 LIPIQ6XZB0 460 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 JAZF1Q86VZ6 243 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 PTRH1Q86Y79 214 aaKnown RBP7.18□□□□□ -1.26
SNX13-211ENST00000496855 SYNPOQ8N3V7 929 aa7.18□□□□□ -1.26
SNX13-211ENST00000496855 MARCH10Q8NA82 808 aaPredicted RBP7.18□□□□□ -1.26
SNX13-211ENST00000496855 MRPL42Q9Y6G3 142 aaKnown RBP7.18□□□□□ -1.26
SNX13-211ENST00000496855 ARID1BQ8NFD5 2236 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms