RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 GPR20Q99678 358 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 KATNAL1Q9BW62 490 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 AGXT2Q9BYV1 514 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 TMEM260Q9NX78 707 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 PPP4R2Q9NY27 417 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 PKD2L1Q9P0L9 805 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 TRANK1O15050 2925 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 SIP14410 1827 aa22.41■■□□□ 1.18
COL20A1-208ENST00000496810 SPDYE3A6NKU9 549 aa22.4■■□□□ 1.18
COL20A1-208ENST00000496810 KCNA2P16389 499 aa22.4■■□□□ 1.18
COL20A1-208ENST00000496810 RCAN1P53805 252 aa22.4■■□□□ 1.18
COL20A1-208ENST00000496810 MYLIPQ8WY64 445 aa22.4■■□□□ 1.18
COL20A1-208ENST00000496810 TIFAQ96CG3 184 aa22.4■■□□□ 1.18
COL20A1-208ENST00000496810 KAT6AQ92794 2004 aa22.4■■□□□ 1.18
COL20A1-208ENST00000496810 NOP56O00567 594 aaKnown RBP22.39■■□□□ 1.17
COL20A1-208ENST00000496810 BFSP2Q13515 415 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 NEDD9Q14511 834 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 TRIM71Q2Q1W2 868 aaKnown RBP22.39■■□□□ 1.17
COL20A1-208ENST00000496810 PPP1R18Q6NYC8 613 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 XRRA1Q6P2D8 792 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 RIC8AQ9NPQ8 531 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 BARHL2Q9NY43 387 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 YBX2Q9Y2T7 364 aaKnown RBP22.39■■□□□ 1.17
COL20A1-208ENST00000496810 UBIAD1Q9Y5Z9 338 aa22.39■■□□□ 1.17
COL20A1-208ENST00000496810 ZBBXA8MT70 800 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 ADCY7P51828 1080 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 RABGGTBP53611 331 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 GRIN2CQ14957 1233 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 TCTN1Q2MV58 587 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 TRAF7Q6Q0C0 670 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 RPUSD2Q8IZ73 545 aaKnown RBP22.38■■□□□ 1.17
COL20A1-208ENST00000496810 CYP2W1Q8TAV3 490 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 PHKBQ93100 1093 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 GPRASP2Q96D09 838 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 USP26Q9BXU7 913 aa22.38■■□□□ 1.17
COL20A1-208ENST00000496810 NCOA5Q9HCD5 579 aaKnown RBP22.38■■□□□ 1.17
COL20A1-208ENST00000496810 H3BRB1 525 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 SMIM10L2AP0DMW4 78 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 SMIM10L2BP0DMW5 78 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 CKBP12277 381 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 MYOGP15173 224 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 HOXC8P31273 242 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 RBL2Q08999 1139 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 TOB2Q14106 344 aaPredicted RBP22.37■■□□□ 1.17
COL20A1-208ENST00000496810 MBTPS1Q14703 1052 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 PKN1Q16512 942 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 PFKFB3Q16875 520 aaPredicted RBP22.37■■□□□ 1.17
COL20A1-208ENST00000496810 UTP14CQ5TAP6 766 aaKnown RBP22.37■■□□□ 1.17
COL20A1-208ENST00000496810 LRRC8DQ7L1W4 858 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 NLRX1Q86UT6 975 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 FBXL16Q8N461 479 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 RETREG2Q8NC44 543 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 CAGE1Q8TC20 777 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 AFAP1L1Q8TED9 768 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 SENP7Q9BQF6 1050 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 LARP6Q9BRS8 491 aaKnown RBP22.37■■□□□ 1.17
COL20A1-208ENST00000496810 ANO3Q9BYT9 981 aa22.37■■□□□ 1.17
COL20A1-208ENST00000496810 UPF3BQ9BZI7 483 aaKnown RBP22.37■■□□□ 1.17
COL20A1-208ENST00000496810 TUT1Q9H6E5 874 aaKnown RBP22.37■■□□□ 1.17
COL20A1-208ENST00000496810 MICAL3Q7RTP6 2002 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 SMCO2A6NFE2 343 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 PFKMP08237 780 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 CLK2P49760 499 aaKnown RBP22.36■■□□□ 1.17
COL20A1-208ENST00000496810 MTMR1Q13613 665 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 NTRK3Q16288 839 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 ZNF576Q9H609 170 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 SLC4A7Q9Y6M7 1214 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 CUL9Q8IWT3 2517 aa22.36■■□□□ 1.17
COL20A1-208ENST00000496810 TMEM265A0A087WTH1 108 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 NBNO60934 754 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 SCG2P13521 617 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 SELPP16109 830 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 RFC2P35250 354 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 CCT2P78371 535 aaKnown RBP22.35■■□□□ 1.17
COL20A1-208ENST00000496810 RUFY3Q7L099 469 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 MTIF3Q9H2K0 278 aaKnown RBP22.35■■□□□ 1.17
COL20A1-208ENST00000496810 NKX2-4Q9H2Z4 354 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 ZSWIM6Q9HCJ5 1215 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 JADE2Q9NQC1 790 aa22.35■■□□□ 1.17
COL20A1-208ENST00000496810 hCG_1984214I3L0E3 225 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 TREHO43280 583 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 PSMA5P28066 241 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 PDIA3P30101 505 aaKnown RBP22.34■■□□□ 1.17
COL20A1-208ENST00000496810 TCF7P36402 384 aaPredicted RBP22.34■■□□□ 1.17
COL20A1-208ENST00000496810 PTK7Q13308 1070 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 ZNF618Q5T7W0 954 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 SERINC5Q86VE9 423 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 CCDC155Q8N6L0 562 aa22.34■■□□□ 1.17
COL20A1-208ENST00000496810 ZNF713Q8N859 430 aaPredicted RBP22.34■■□□□ 1.17
COL20A1-208ENST00000496810 FTOQ9C0B1 505 aaKnown RBP eCLIP22.34■■□□□ 1.17
COL20A1-208ENST00000496810 GSTTP1A0A1W2PQM5 241 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 ATP2A2P16615 1042 aaKnown RBP22.33■■□□□ 1.17
COL20A1-208ENST00000496810 EVCP57679 992 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 JAKMIP3Q5VZ66 844 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 OSBPL7Q9BZF2 842 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 RNPEPQ9H4A4 650 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 KCNH7Q9NS40 1196 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 SETD4Q9NVD3 440 aa22.33■■□□□ 1.17
COL20A1-208ENST00000496810 WDR81Q562E7 1941 aa22.33■■□□□ 1.16
COL20A1-208ENST00000496810 SPTBN5Q9NRC6 3674 aaKnown RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms