RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 IGDCC4Q8TDY8 1250 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 RRP36Q96EU6 259 aaKnown RBP12.57□□□□□ -0.4
RNF220-217ENST00000496262 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 SEC63Q9UGP8 760 aaKnown RBP12.57□□□□□ -0.4
RNF220-217ENST00000496262 MTCH2Q9Y6C9 303 aa12.57□□□□□ -0.4
RNF220-217ENST00000496262 C17orf102A2RUQ5 167 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 H3BRB1 525 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 PLEKHA8P1O95397 391 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 LGALS2P05162 132 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 CTSHP09668 335 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 SMIM10L2AP0DMW4 78 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 SMIM10L2BP0DMW5 78 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 MRPS9P82933 396 aaKnown RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 IKBKEQ14164 716 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 MBTPS1Q14703 1052 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 TRIM71Q2Q1W2 868 aaKnown RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 UTP14CQ5TAP6 766 aaKnown RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 USP17L6PQ6QN14 398 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 TRIM50Q86XT4 487 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 CUL5Q93034 780 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 TUT1Q9H6E5 874 aaKnown RBP12.56□□□□□ -0.4
RNF220-217ENST00000496262 TRANK1O15050 2925 aa12.56□□□□□ -0.4
RNF220-217ENST00000496262 TTC28Q96AY4 2481 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 CCDC69A6NI79 296 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 DDAH1O94760 285 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 PARNO95453 639 aaKnown RBP12.55□□□□□ -0.4
RNF220-217ENST00000496262 CXCL10P02778 98 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 TGFB3P10600 412 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 KIF5BP33176 963 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 KCNQ1P51787 676 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 RBL2Q08999 1139 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 GRB10Q13322 594 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 COL9A3Q14050 684 aaPredicted RBP12.55□□□□□ -0.4
RNF220-217ENST00000496262 TRAF7Q6Q0C0 670 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 SERINC5Q86VE9 423 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 GDPD5Q8WTR4 605 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 LRRC2Q9BYS8 371 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 TELO2Q9Y4R8 837 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
RNF220-217ENST00000496262 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 RSPH10B2B2RC85 870 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 SPATA31C2B4DYI2 1134 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 SH2B2O14492 632 aaPredicted RBP12.54□□□□□ -0.4
RNF220-217ENST00000496262 FIBPO43427 364 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 LGR5O75473 907 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 GJB5O95377 273 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 RSPH10BP0C881 870 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 MCM5P33992 734 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 NEDD9Q14511 834 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
RNF220-217ENST00000496262 MYOCDQ8IZQ8 938 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 TET1Q8NFU7 2136 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
RNF220-217ENST00000496262 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 SLKQ9H2G2 1235 aaPredicted RBP12.54□□□□□ -0.4
RNF220-217ENST00000496262 SETD4Q9NVD3 440 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
RNF220-217ENST00000496262 TRIP12Q14669 1992 aaPredicted RBP12.54□□□□□ -0.4
RNF220-217ENST00000496262 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
RNF220-217ENST00000496262 SLC27A2O14975 620 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 TREHO43280 583 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 LPXNO60711 386 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 STAM2O75886 525 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 UBE2SQ16763 222 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 SRBD1Q8N5C6 995 aaKnown RBP12.53□□□□□ -0.4
RNF220-217ENST00000496262 DBF4BQ8NFT6 615 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 RAD9AQ99638 391 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 GPR20Q99678 358 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 LSG1Q9H089 658 aaKnown RBP12.53□□□□□ -0.4
RNF220-217ENST00000496262 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 ANO2Q9NQ90 1003 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
RNF220-217ENST00000496262 FRMPD4Q14CM0 1322 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
RNF220-217ENST00000496262 MYH7BA7E2Y1 1941 aa12.52□□□□□ -0.4
RNF220-217ENST00000496262 PTPRSQ13332 1948 aa12.52□□□□□ -0.4
RNF220-217ENST00000496262 LINC01553A4QN01 128 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 MEIS2O14770 477 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 EFCAB14O75071 495 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 AMHP03971 560 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 ICAM3P32942 547 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 ARHGAP4P98171 946 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 AAK1Q2M2I8 961 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 CREB3L3Q68CJ9 461 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 NLRX1Q86UT6 975 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms