RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
TMEM53-209ENST00000495630 RNPEPQ9H4A4 650 aa20.37■□□□□ 0.85
TMEM53-209ENST00000495630 MAD2L2Q9UI95 211 aa20.37■□□□□ 0.85
TMEM53-209ENST00000495630 PRR33A8MZF0 331 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 SMIM10L2AP0DMW4 78 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 SMIM10L2BP0DMW5 78 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 GNAT1P11488 350 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 SEC23AQ15436 765 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 IL31RAQ8NI17 732 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 YME1L1Q96TA2 773 aa20.36■□□□□ 0.85
TMEM53-209ENST00000495630 RWDD1Q9H446 243 aaPredicted RBP20.36■□□□□ 0.85
TMEM53-209ENST00000495630 TREHO43280 583 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 IL9P15248 144 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 SSTR3P32745 418 aaPredicted RBP20.35■□□□□ 0.85
TMEM53-209ENST00000495630 GPM6BQ13491 265 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 TIGD5Q53EQ6 642 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 B4GALNT3Q6L9W6 998 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 CHD1LQ86WJ1 897 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 TMEM192Q8IY95 271 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 BANK1Q8NDB2 785 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 RIOX1Q9H6W3 641 aa20.35■□□□□ 0.85
TMEM53-209ENST00000495630 STAM2O75886 525 aa20.34■□□□□ 0.85
TMEM53-209ENST00000495630 LGALS2P05162 132 aa20.34■□□□□ 0.85
TMEM53-209ENST00000495630 ICAM3P32942 547 aa20.34■□□□□ 0.85
TMEM53-209ENST00000495630 GNPTABQ3T906 1256 aa20.34■□□□□ 0.85
TMEM53-209ENST00000495630 FCHSD1Q86WN1 690 aa20.34■□□□□ 0.85
TMEM53-209ENST00000495630 GPKOWQ92917 476 aaPredicted RBP eCLIP20.34■□□□□ 0.85
TMEM53-209ENST00000495630 FAM50BQ9Y247 325 aa20.34■□□□□ 0.85
TMEM53-209ENST00000495630 COL4A4P53420 1690 aaPredicted RBP20.34■□□□□ 0.85
TMEM53-209ENST00000495630 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-209ENST00000495630 NOP56O00567 594 aaKnown RBP20.33■□□□□ 0.85
TMEM53-209ENST00000495630 UPP2O95045 317 aa20.33■□□□□ 0.85
TMEM53-209ENST00000495630 NEDD9Q14511 834 aa20.33■□□□□ 0.85
TMEM53-209ENST00000495630 COL19A1Q14993 1142 aa20.33■□□□□ 0.85
TMEM53-209ENST00000495630 APBB2Q92870 758 aa20.33■□□□□ 0.85
TMEM53-209ENST00000495630 PABPC5Q96DU9 382 aaKnown RBP20.33■□□□□ 0.85
TMEM53-209ENST00000495630 ZFP91Q96JP5 570 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-209ENST00000495630 BCAS3Q9H6U6 928 aa20.33■□□□□ 0.85
TMEM53-209ENST00000495630 MYH7BA7E2Y1 1941 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 PNMA6FA0A0J9YX94 578 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 SPATA31C2B4DYI2 1134 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 RBAK-RBAKDNI3L0D1 243 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 NCK2O43639 380 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 NUCB1Q02818 461 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 TCEAL5Q5H9L2 206 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 FAM26DQ5JW98 314 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 INPP4AQ96PE3 977 aaPredicted RBP20.32■□□□□ 0.84
TMEM53-209ENST00000495630 PIGSQ96S52 555 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 SETD4Q9NVD3 440 aa20.32■□□□□ 0.84
TMEM53-209ENST00000495630 POTEB3A0JP26 581 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 H3BQ06 376 aaPredicted RBP20.31■□□□□ 0.84
TMEM53-209ENST00000495630 ADAM17P78536 824 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 MRPS9P82933 396 aaKnown RBP20.31■□□□□ 0.84
TMEM53-209ENST00000495630 TRDNQ13061 729 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 GRM4Q14833 912 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 POTEBQ6S5H4 581 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 CYB5R4Q7L1T6 521 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 GPR20Q99678 358 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 IFIH1Q9BYX4 1025 aaKnown RBP20.31■□□□□ 0.84
TMEM53-209ENST00000495630 OSBPL7Q9BZF2 842 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 NSUN3Q9H649 340 aaKnown RBP20.31■□□□□ 0.84
TMEM53-209ENST00000495630 PRKAG3Q9UGI9 489 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 SIP14410 1827 aa20.31■□□□□ 0.84
TMEM53-209ENST00000495630 RB1P06400 928 aa20.3■□□□□ 0.84
TMEM53-209ENST00000495630 CTSHP09668 335 aa20.3■□□□□ 0.84
TMEM53-209ENST00000495630 CYFIP1Q7L576 1253 aa20.3■□□□□ 0.84
TMEM53-209ENST00000495630 IL17RAQ96F46 866 aa20.3■□□□□ 0.84
TMEM53-209ENST00000495630 FIBPO43427 364 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 DCXO43602 365 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 CYTH3O43739 400 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 CSPP1Q1MSJ5 1256 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 RPAINQ86UA6 219 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 FIBCD1Q8N539 461 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 SENP7Q9BQF6 1050 aa20.29■□□□□ 0.84
TMEM53-209ENST00000495630 ZNF215Q9UL58 517 aaPredicted RBP20.29■□□□□ 0.84
TMEM53-209ENST00000495630 FRMPD4Q14CM0 1322 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 NRCAMQ92823 1304 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 MYH6P13533 1939 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 C19orf67A6NJJ6 358 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 C5orf67F2Z3F1 127 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
TMEM53-209ENST00000495630 SEMA3FQ13275 785 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 XRRA1Q6P2D8 792 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 EP400NLQ6ZTU2 488 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 UIMC1Q96RL1 719 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 RTEL1Q9NZ71 1219 aa20.28■□□□□ 0.84
TMEM53-209ENST00000495630 MICAL3Q7RTP6 2002 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 PIEZO1Q92508 2521 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 ERICH2A1L162 156 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 IGHDP01880 384 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 CHRNA1P02708 482 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 BMPR1AP36894 532 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 ARHGAP4P98171 946 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 ZP2Q05996 745 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 GIMAP8Q8ND71 665 aaPredicted RBP20.27■□□□□ 0.84
TMEM53-209ENST00000495630 UPF3BQ9BZI7 483 aaKnown RBP20.27■□□□□ 0.84
TMEM53-209ENST00000495630 LMAN2LQ9H0V9 348 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms