RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 MAP3K14Q99558 947 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 USP26Q9BXU7 913 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 LMCD1Q9NZU5 365 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 SIP14410 1827 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 KAT6AQ92794 2004 aa17.04■□□□□ 0.32
PTPN18-216ENST00000495400 REV3LO60673 3130 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 SPATA31C2B4DYI2 1134 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 NOP56O00567 594 aaKnown RBP17.03■□□□□ 0.32
PTPN18-216ENST00000495400 SMIM10L2AP0DMW4 78 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 SMIM10L2BP0DMW5 78 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 HOXC8P31273 242 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 KCNQ1P51787 676 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 DBF4BQ8NFT6 615 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
PTPN18-216ENST00000495400 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 RRP36Q96EU6 259 aaKnown RBP17.03■□□□□ 0.32
PTPN18-216ENST00000495400 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
PTPN18-216ENST00000495400 SPZ1Q9BXG8 430 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 RTEL1Q9NZ71 1219 aa17.03■□□□□ 0.32
PTPN18-216ENST00000495400 LINC01553A4QN01 128 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 FIBPO43427 364 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 DDAH1O94760 285 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 SMARCA1P28370 1054 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 KIF5BP33176 963 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 ERVK-21P61565 698 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 SEMA3FQ13275 785 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 FAM117BQ6P1L5 589 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 METTL7BQ6UX53 244 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTPN18-216ENST00000495400 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 ZNF654Q8IZM8 581 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 CUL5Q93034 780 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 HLA-CQ95604 372 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 NECAB3Q96P71 396 aaPredicted RBP17.02■□□□□ 0.32
PTPN18-216ENST00000495400 GPR20Q99678 358 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 MTA3Q9BTC8 594 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 LY9Q9HBG7 655 aa17.02■□□□□ 0.32
PTPN18-216ENST00000495400 RBM8AQ9Y5S9 174 aaKnown RBP17.02■□□□□ 0.32
PTPN18-216ENST00000495400 BDP1A6H8Y1 2624 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 TREHO43280 583 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 CAND2O75155 1236 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 AMHP03971 560 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 GNAT1P11488 350 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 COL9A1P20849 921 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 PCNX4Q63HM2 1172 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 XRRA1Q6P2D8 792 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 USP17L6PQ6QN14 398 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 LZTS2Q9BRK4 669 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 SUGCTQ9HAC7 445 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
PTPN18-216ENST00000495400 INSL6Q9Y581 213 aa17.01■□□□□ 0.31
PTPN18-216ENST00000495400 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 PIK3CDO00329 1044 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 GNAQP50148 359 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
PTPN18-216ENST00000495400 PLEKHG4Q58EX7 1191 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 NLRX1Q86UT6 975 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 MYOCDQ8IZQ8 938 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 TMTC2Q8N394 836 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 SENP7Q9BQF6 1050 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 SETD4Q9NVD3 440 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 MTUS1Q9ULD2 1270 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 MUC3AQ02505 3323 aa17■□□□□ 0.31
PTPN18-216ENST00000495400 MEIS2O14770 477 aa16.99■□□□□ 0.31
PTPN18-216ENST00000495400 PRC1O43663 620 aa16.99■□□□□ 0.31
PTPN18-216ENST00000495400 HTRA4P83105 476 aaPredicted RBP16.99■□□□□ 0.31
PTPN18-216ENST00000495400 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
PTPN18-216ENST00000495400 NFXL1Q6ZNB6 911 aa16.99■□□□□ 0.31
PTPN18-216ENST00000495400 SEPT8Q92599 483 aa16.99■□□□□ 0.31
PTPN18-216ENST00000495400 ZNF215Q9UL58 517 aaPredicted RBP16.99■□□□□ 0.31
PTPN18-216ENST00000495400 BRWD1Q9NSI6 2320 aa16.98■□□□□ 0.31
PTPN18-216ENST00000495400 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
PTPN18-216ENST00000495400 MCM5P33992 734 aa16.98■□□□□ 0.31
PTPN18-216ENST00000495400 IRX6P78412 446 aaPredicted RBP16.98■□□□□ 0.31
PTPN18-216ENST00000495400 TRIM50Q86XT4 487 aa16.98■□□□□ 0.31
PTPN18-216ENST00000495400 SRBD1Q8N5C6 995 aaKnown RBP16.98■□□□□ 0.31
PTPN18-216ENST00000495400 GIMAP8Q8ND71 665 aaPredicted RBP16.98■□□□□ 0.31
PTPN18-216ENST00000495400 TMEM87BQ96K49 555 aa16.98■□□□□ 0.31
PTPN18-216ENST00000495400 SH2B2O14492 632 aaPredicted RBP16.97■□□□□ 0.31
PTPN18-216ENST00000495400 PLEKHA8P1O95397 391 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 CTSHP09668 335 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 CALM1P0DP23 149 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 CALM2P0DP24 149 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 CALM3P0DP25 149 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 ADAM17P78536 824 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 SP4Q02446 784 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 FBXO22Q8NEZ5 403 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 SP7Q8TDD2 431 aaPredicted RBP16.97■□□□□ 0.31
PTPN18-216ENST00000495400 GPRASP2Q96D09 838 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 LSG1Q9H089 658 aaKnown RBP16.97■□□□□ 0.31
PTPN18-216ENST00000495400 PSTPIP2Q9H939 334 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 TELO2Q9Y4R8 837 aa16.97■□□□□ 0.31
PTPN18-216ENST00000495400 LIFRP42702 1097 aa16.96■□□□□ 0.31
PTPN18-216ENST00000495400 ARHGAP4P98171 946 aa16.96■□□□□ 0.31
PTPN18-216ENST00000495400 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
PTPN18-216ENST00000495400 CMTR1Q8N1G2 835 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms