RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 HOXD8P13378 290 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 PTPN11Q06124 597 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 FAM117BQ6P1L5 589 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 LRRC8DQ7L1W4 858 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 DHX32Q7L7V1 743 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 EMID1Q96A84 441 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 ZBTB10Q96DT7 871 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 SPATA33Q96N06 139 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 LIMCH1Q9UPQ0 1083 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 SIP14410 1827 aa11.76□□□□□ -0.53
SOX2-OT-215ENST00000493521 KPNA6O60684 536 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 EXOSC10Q01780 885 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 CUL4AQ13619 759 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 WTAPQ15007 396 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 DGKDQ16760 1214 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 Q6ZUG5 572 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 SRBD1Q8N5C6 995 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 NCOA7Q8NI08 942 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 PPTC7Q8NI37 304 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 ASB2Q96Q27 587 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 SEZ6LQ9BYH1 1024 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 THEGQ9P2T0 379 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 PNMA2Q9UL42 364 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
SOX2-OT-215ENST00000493521 PNMA6FA0A0J9YX94 578 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 GCOM1H8Y6P7 765 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 MEIS2O14770 477 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 ADAMTS3O15072 1205 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 TREHO43280 583 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 ATP9AO75110 1047 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 LARGE1O95461 756 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 CXCL10P02778 98 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 POLR2MP0CAP2 368 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 SELPP16109 830 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 SP4Q02446 784 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 RBL2Q08999 1139 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 TRDNQ13061 729 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 GRB10Q13322 594 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 BFSP2Q13515 415 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 LAMC2Q13753 1193 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 UBE2SQ16763 222 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 BRDTQ58F21 947 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 RALYLQ86SE5 291 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 ZNF654Q8IZM8 581 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 C7orf31Q8N865 590 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 ADAMTS19Q8TE59 1207 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 ZSCAN31Q96LW9 406 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
SOX2-OT-215ENST00000493521 SH2B2O14492 632 aaPredicted RBP11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 PRC1O43663 620 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 LGR5O75473 907 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 LGALS2P05162 132 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 PFKMP08237 780 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 CTSHP09668 335 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 SMIM10L2AP0DMW4 78 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 SMIM10L2BP0DMW5 78 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 RFC2P35250 354 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 DDIT3P35638 169 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 FGD1P98174 961 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 ME3Q16798 604 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 DBF4BQ8NFT6 615 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 CAGE1Q8TC20 777 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 AFAP1L1Q8TED9 768 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 TTC28Q96AY4 2481 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 SLC9A7Q96T83 725 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 CHMP5Q9NZZ3 219 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
SOX2-OT-215ENST00000493521 B4DLN1 442 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 TLL1O43897 1013 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 ACTN1P12814 892 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 BMP1P13497 986 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 CCND2P30279 289 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 HOXC8P31273 242 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 MCM5P33992 734 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 THPOP40225 353 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 PTK7Q13308 1070 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 UTP14CQ5TAP6 766 aaKnown RBP11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
SOX2-OT-215ENST00000493521 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms