RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 HFE2Q6ZVN8 426 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 TUT1Q9H6E5 874 aaKnown RBP15.96■□□□□ 0.15
GPNMB-213ENST00000492512 MLXIPQ9HAP2 919 aa15.96■□□□□ 0.15
GPNMB-213ENST00000492512 LAMA4Q16363 1823 aa15.96■□□□□ 0.14
GPNMB-213ENST00000492512 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.95■□□□□ 0.14
GPNMB-213ENST00000492512 TRIM6-TRIM34B2RNG4 842 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 TREHO43280 583 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 CAND2O75155 1236 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 SMIM10L2AP0DMW4 78 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 SMIM10L2BP0DMW5 78 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 TGFB3P10600 412 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 UBA1P22314 1058 aaKnown RBP15.95■□□□□ 0.14
GPNMB-213ENST00000492512 CTNNB1P35222 781 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 NT5C2P49902 561 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 MFAP1P55081 439 aaKnown RBP15.95■□□□□ 0.14
GPNMB-213ENST00000492512 SP2Q02086 613 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 STOX1Q6ZVD7 989 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 VSIG10LQ86VR7 867 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 FIBCD1Q8N539 461 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 ANKS1AQ92625 1134 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 APBB2Q92870 758 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 MFSD14AQ96MC6 490 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 ZSCAN10Q96SZ4 725 aaPredicted RBP15.95■□□□□ 0.14
GPNMB-213ENST00000492512 POP1Q99575 1024 aaKnown RBP15.95■□□□□ 0.14
GPNMB-213ENST00000492512 RNPEPQ9H4A4 650 aa15.95■□□□□ 0.14
GPNMB-213ENST00000492512 MAP3K20Q9NYL2 800 aaKnown RBP15.95■□□□□ 0.14
GPNMB-213ENST00000492512 NOP56O00567 594 aaKnown RBP15.94■□□□□ 0.14
GPNMB-213ENST00000492512 OPLAHO14841 1288 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 LGALS2P05162 132 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 HOXC8P31273 242 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 LTBRP36941 435 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 GHRHRQ02643 423 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 PGM5Q15124 567 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 CLUL1Q15846 466 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
GPNMB-213ENST00000492512 IL17RAQ96F46 866 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 OSBPL7Q9BZF2 842 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 LMAN2LQ9H0V9 348 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 TECTAO75443 2155 aa15.94■□□□□ 0.14
GPNMB-213ENST00000492512 DOCK5Q9H7D0 1870 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 B4E1Z4 1266 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 RB1P06400 928 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 GNAT1P11488 350 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 CCND2P30279 289 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 HOXA13P31271 388 aaPredicted RBP15.93■□□□□ 0.14
GPNMB-213ENST00000492512 SMAD2Q15796 467 aaKnown RBP15.93■□□□□ 0.14
GPNMB-213ENST00000492512 CTC1Q2NKJ3 1217 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 IL31RAQ8NI17 732 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 C11orf84Q9BUA3 381 aaPredicted RBP15.93■□□□□ 0.14
GPNMB-213ENST00000492512 MUTYHQ9UIF7 546 aa15.93■□□□□ 0.14
GPNMB-213ENST00000492512 BAZ2BQ9UIF8 2168 aaKnown RBP15.92■□□□□ 0.14
GPNMB-213ENST00000492512 C5orf67F2Z3F1 127 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 MBTPS2O43462 519 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 DLX2Q07687 328 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-213ENST00000492512 HYAL1Q12794 435 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 HERC4Q5GLZ8 1057 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-213ENST00000492512 DIEXFQ68CQ4 756 aaKnown RBP15.92■□□□□ 0.14
GPNMB-213ENST00000492512 SAMD3Q8N6K7 520 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 GPKOWQ92917 476 aaPredicted RBP eCLIP15.92■□□□□ 0.14
GPNMB-213ENST00000492512 RILPL2Q969X0 211 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 ZFP91Q96JP5 570 aaPredicted RBP15.92■□□□□ 0.14
GPNMB-213ENST00000492512 USP26Q9BXU7 913 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 SETD4Q9NVD3 440 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 RWDD3Q9Y3V2 267 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 PCDHA1Q9Y5I3 950 aa15.92■□□□□ 0.14
GPNMB-213ENST00000492512 GRM6O15303 877 aa15.91■□□□□ 0.14
GPNMB-213ENST00000492512 BMPR1AP36894 532 aa15.91■□□□□ 0.14
GPNMB-213ENST00000492512 RNF135Q8IUD6 432 aa15.91■□□□□ 0.14
GPNMB-213ENST00000492512 STAG2Q8N3U4 1231 aa15.91■□□□□ 0.14
GPNMB-213ENST00000492512 IGFLR1Q9H665 355 aa15.91■□□□□ 0.14
GPNMB-213ENST00000492512 ZSWIM5Q9P217 1185 aa15.91■□□□□ 0.14
GPNMB-213ENST00000492512 ZDBF2Q9HCK1 2354 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 KLRF2D3W0D1 207 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 GCOM1H8Y6P7 765 aaPredicted RBP15.9■□□□□ 0.14
GPNMB-213ENST00000492512 STXBP3O00186 592 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 ZBTB5O15062 677 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 PPP1R11O60927 126 aaPredicted RBP15.9■□□□□ 0.14
GPNMB-213ENST00000492512 CSPG5O95196 566 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 POLR2MP0CAP2 368 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 SMAD4Q13485 552 aaKnown RBP15.9■□□□□ 0.14
GPNMB-213ENST00000492512 GNPTABQ3T906 1256 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 FCHSD1Q86WN1 690 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 UBAC1Q9BSL1 405 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 BCAS3Q9H6U6 928 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
GPNMB-213ENST00000492512 TTC3P53804 2025 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 ADGRA3Q8IWK6 1321 aa15.9■□□□□ 0.14
GPNMB-213ENST00000492512 TBX10O75333 385 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 ARHGAP4P98171 946 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 TRAF1Q13077 416 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 NEDD9Q14511 834 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 FAM26DQ5JW98 314 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 IFIT1BQ5T764 474 aaKnown RBP15.89■□□□□ 0.13
GPNMB-213ENST00000492512 METTL7BQ6UX53 244 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 CYFIP1Q7L576 1253 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 HOMER1Q86YM7 354 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 EDAQ92838 391 aa15.89■□□□□ 0.13
GPNMB-213ENST00000492512 CLP1Q92989 425 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms