RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TTC22Q5TAA0 569 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 MYOCDQ8IZQ8 938 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 YTHDC1Q96MU7 727 aaKnown RBP18.37■□□□□ 0.53
PLOD3-216ENST00000489927 C17orf80Q9BSJ5 609 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 EPHX3Q9H6B9 360 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 INSL6Q9Y581 213 aa18.37■□□□□ 0.53
PLOD3-216ENST00000489927 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
PLOD3-216ENST00000489927 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
PLOD3-216ENST00000489927 TREHO43280 583 aa18.36■□□□□ 0.53
PLOD3-216ENST00000489927 HTRA4P83105 476 aaPredicted RBP18.36■□□□□ 0.53
PLOD3-216ENST00000489927 FRMPD4Q14CM0 1322 aa18.36■□□□□ 0.53
PLOD3-216ENST00000489927 WTAPQ15007 396 aa18.36■□□□□ 0.53
PLOD3-216ENST00000489927 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
PLOD3-216ENST00000489927 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
PLOD3-216ENST00000489927 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
PLOD3-216ENST00000489927 RNPEPQ9H4A4 650 aa18.36■□□□□ 0.53
PLOD3-216ENST00000489927 SIP14410 1827 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 SPATA31C2B4DYI2 1134 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 E7EWF7 191 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 ICAM3P32942 547 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 METTL7BQ6UX53 244 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 CYFIP1Q7L576 1253 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
PLOD3-216ENST00000489927 FBXO22Q8NEZ5 403 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 NCOA7Q8NI08 942 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 RTEL1Q9NZ71 1219 aa18.35■□□□□ 0.53
PLOD3-216ENST00000489927 STAM2O75886 525 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 CTSHP09668 335 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 CHMLP26374 656 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 SEMA3FQ13275 785 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 NEDD9Q14511 834 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 SART3Q15020 963 aaKnown RBP18.34■□□□□ 0.53
PLOD3-216ENST00000489927 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
PLOD3-216ENST00000489927 SEPT8Q92599 483 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.53
PLOD3-216ENST00000489927 GPR20Q99678 358 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 UBE2ZQ9H832 354 aaPredicted RBP18.34■□□□□ 0.53
PLOD3-216ENST00000489927 SETD4Q9NVD3 440 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 TELO2Q9Y4R8 837 aa18.34■□□□□ 0.53
PLOD3-216ENST00000489927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.33■□□□□ 0.52
PLOD3-216ENST00000489927 FIBPO43427 364 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 CAND2O75155 1236 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 PLA2G5P39877 138 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 ANTXR2P58335 489 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 CATIPQ7Z7H3 387 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 TRIM50Q86XT4 487 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
PLOD3-216ENST00000489927 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 UPP2O95045 317 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 EPC2Q52LR7 807 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 USP17L6PQ6QN14 398 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 IGDCC4Q8TDY8 1250 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 TOP1MTQ969P6 601 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 LRFN3Q9BTN0 628 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 CD320Q9NPF0 282 aa18.32■□□□□ 0.52
PLOD3-216ENST00000489927 BAZ2BQ9UIF8 2168 aaKnown RBP18.32■□□□□ 0.52
PLOD3-216ENST00000489927 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.31■□□□□ 0.52
PLOD3-216ENST00000489927 GNAT1P11488 350 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 KCNA5P22460 613 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 SP4Q02446 784 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 LEXMQ3ZCV2 418 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 UTP14CQ5TAP6 766 aaKnown RBP18.31■□□□□ 0.52
PLOD3-216ENST00000489927 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
PLOD3-216ENST00000489927 SMARCC2Q8TAQ2 1214 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
PLOD3-216ENST00000489927 FAM122AQ96E09 287 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 YME1L1Q96TA2 773 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 MYL10Q9BUA6 226 aa18.31■□□□□ 0.52
PLOD3-216ENST00000489927 ZNF215Q9UL58 517 aaPredicted RBP18.31■□□□□ 0.52
PLOD3-216ENST00000489927 MEIS2O14770 477 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 SGSM2O43147 1006 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 ADAM17P78536 824 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 ARHGAP4P98171 946 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 TMEM31Q5JXX7 168 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 PCNX4Q63HM2 1172 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.3■□□□□ 0.52
PLOD3-216ENST00000489927 RRP36Q96EU6 259 aaKnown RBP18.3■□□□□ 0.52
PLOD3-216ENST00000489927 SENP7Q9BQF6 1050 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 SPZ1Q9BXG8 430 aa18.3■□□□□ 0.52
PLOD3-216ENST00000489927 PIK3CDO00329 1044 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 PTPROQ16827 1216 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 FAM26DQ5JW98 314 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 ZNF654Q8IZM8 581 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 CTCFLQ8NI51 663 aaPredicted RBP18.29■□□□□ 0.52
PLOD3-216ENST00000489927 APBB2Q92870 758 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 MAP4K1Q92918 833 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 CUL5Q93034 780 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 SAMD11Q96NU1 681 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 MAP3K14Q99558 947 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 IFIH1Q9BYX4 1025 aaKnown RBP18.29■□□□□ 0.52
PLOD3-216ENST00000489927 LY9Q9HBG7 655 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 C11orf16Q9NQ32 467 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 SUPT16HQ9Y5B9 1047 aaKnown RBP18.29■□□□□ 0.52
PLOD3-216ENST00000489927 DOCK5Q9H7D0 1870 aa18.29■□□□□ 0.52
PLOD3-216ENST00000489927 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
PLOD3-216ENST00000489927 H3BNC9 293 aa18.28■□□□□ 0.52
PLOD3-216ENST00000489927 DDAH1O94760 285 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms