RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 UBA1P22314 1058 aaKnown RBP12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 RRP1P56182 461 aaKnown RBP12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 PLEKHG4Q58EX7 1191 aa12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 STOX1Q6ZVD7 989 aa12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 VSIG10LQ86VR7 867 aa12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 ATP6V0A1Q93050 837 aa12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 BCAS3Q9H6U6 928 aa12.56□□□□□ -0.4
PTP4A2-206ENST00000489313 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 C17orf102A2RUQ5 167 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 GRXCR2A6NFK2 248 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 TREHO43280 583 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 GHRHRQ02643 423 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 PGM5Q15124 567 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 KCNV1Q6PIU1 500 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 EP400NLQ6ZTU2 488 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 UIMC1Q96RL1 719 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 YME1L1Q96TA2 773 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 UBAC1Q9BSL1 405 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 PCDHA1Q9Y5I3 950 aa12.55□□□□□ -0.4
PTP4A2-206ENST00000489313 PRR33A8MZF0 331 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 H3BRB1 525 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 SMIM10L2AP0DMW4 78 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 SMIM10L2BP0DMW5 78 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 NT5C2P49902 561 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 GPM6BQ13491 265 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 PTPROQ16827 1216 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 TCEAL5Q5H9L2 206 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 IFIT1BQ5T764 474 aaKnown RBP12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 FCHSD1Q86WN1 690 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 HOMER1Q86YM7 354 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 BANK1Q8NDB2 785 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 SEPT8Q92599 483 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 DIAPH3Q9NSV4 1193 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 CTNNA3Q9UI47 895 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 KAT6AQ92794 2004 aa12.54□□□□□ -0.4
PTP4A2-206ENST00000489313 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 H3BNC9 293 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 ZBTB5O15062 677 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 LGALS2P05162 132 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 CCND2P30279 289 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 HOXC8P31273 242 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 IMMTQ16891 758 aaKnown RBP12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 SLC35G1Q2M3R5 365 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 TIGD5Q53EQ6 642 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 TMEM192Q8IY95 271 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 SAMD11Q96NU1 681 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 KRT23Q9C075 422 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 RNPEPQ9H4A4 650 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 MAD2L2Q9UI95 211 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
PTP4A2-206ENST00000489313 TGFB3P10600 412 aa12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 ALADP13716 330 aa12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 ALYREFQ86V81 257 aaKnown RBP12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 PIGSQ96S52 555 aa12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 IFIH1Q9BYX4 1025 aaKnown RBP12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 SETD4Q9NVD3 440 aa12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 MAP3K20Q9NYL2 800 aaKnown RBP12.52□□□□□ -0.4
PTP4A2-206ENST00000489313 PALM3A6NDB9 673 aaPredicted RBP12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 GCOM1H8Y6P7 765 aaPredicted RBP12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 POLR2MP0CAP2 368 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 SEC23AQ15436 765 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 PUS10Q3MIT2 529 aaKnown RBP12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 CYB5R4Q7L1T6 521 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 TRIM50Q86XT4 487 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 PABPC5Q96DU9 382 aaKnown RBP12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 DSCC1Q9BVC3 393 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 CNNM2Q9H8M5 875 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 CLDND1Q9NY35 253 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 TELO2Q9Y4R8 837 aa12.52□□□□□ -0.41
PTP4A2-206ENST00000489313 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 COL4A6Q14031 1691 aa12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 DCXO43602 365 aa12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 ZP2Q05996 745 aa12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 SUPT16HQ9Y5B9 1047 aaKnown RBP12.51□□□□□ -0.41
PTP4A2-206ENST00000489313 CTNNB1P35222 781 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 SP4Q02446 784 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 COL19A1Q14993 1142 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 CLUL1Q15846 466 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 UTP14CQ5TAP6 766 aaKnown RBP12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 SMC5Q8IY18 1101 aa12.5□□□□□ -0.41
PTP4A2-206ENST00000489313 SAMD3Q8N6K7 520 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms