RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ATF2P15336 505 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 SDSP20132 328 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 CNGA1P29973 690 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 RPL11P62913 178 aaKnown RBP5.97□□□□□ -1.45
XRN1-213ENST00000489241 FOXO4P98177 505 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 INF2Q27J81 1249 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 DENND5AQ6IQ26 1287 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 STYK1Q6J9G0 422 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 FRMD5Q7Z6J6 570 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 IFNL3Q8IZI9 196 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 LZTR1Q8N653 840 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 PRPF38AQ8NAV1 312 aaKnown RBP5.97□□□□□ -1.45
XRN1-213ENST00000489241 FNIP1Q8TF40 1166 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 ADAM7Q9H2U9 754 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 CAAP1Q9H8G2 361 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 NUDT5Q9UKK9 219 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 ATP8A1Q9Y2Q0 1164 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 RWDD3Q9Y3V2 267 aa5.97□□□□□ -1.45
XRN1-213ENST00000489241 BLACEA4D250 179 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 PARNO95453 639 aaKnown RBP5.96□□□□□ -1.46
XRN1-213ENST00000489241 ASGR2P07307 311 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 CELA3BP08861 270 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 PDGFRBP09619 1106 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 MC3RP41968 323 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 KCNC1P48547 511 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 CDKN1CP49918 316 aaPredicted RBP5.96□□□□□ -1.46
XRN1-213ENST00000489241 SLURP1P55000 103 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 HTRA3P83110 453 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 NTRK3Q16288 839 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 SKOR2Q2VWA4 1001 aaPredicted RBP5.96□□□□□ -1.46
XRN1-213ENST00000489241 B3GNT8Q7Z7M8 397 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 RNF180Q86T96 592 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 CCDC103Q8IW40 242 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 UBR7Q8N806 425 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 RCBTB1Q8NDN9 531 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 USP33Q8TEY7 942 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 PEX11GQ96HA9 241 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 CHAMP1Q96JM3 812 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 PHF20Q9BVI0 1012 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.96□□□□□ -1.46
XRN1-213ENST00000489241 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
XRN1-213ENST00000489241 ARNTLO00327 626 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 C6orf222P0C671 652 aaPredicted RBP5.95□□□□□ -1.46
XRN1-213ENST00000489241 PMLP29590 882 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 EVA1CP58658 441 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 GPR85P60893 370 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 LSAMPQ13449 338 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 SLC9A5Q14940 896 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 TRIM61Q5EBN2 209 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 LIPIQ6XZB0 460 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 CEP68Q76N32 757 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 SAPCD2Q86UD0 394 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
XRN1-213ENST00000489241 MTA3Q9BTC8 594 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 TARS2Q9BW92 718 aaKnown RBP5.95□□□□□ -1.46
XRN1-213ENST00000489241 GULP1Q9UBP9 304 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 NDOR1Q9UHB4 597 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 PCDHA2Q9Y5H9 948 aa5.95□□□□□ -1.46
XRN1-213ENST00000489241 SH3D21A4FU49 640 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 FAM83GA6ND36 823 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 H7BY64 318 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 DNAJC8O75937 253 aaPredicted RBP5.94□□□□□ -1.46
XRN1-213ENST00000489241 S100BP04271 92 aaPredicted RBP5.94□□□□□ -1.46
XRN1-213ENST00000489241 SOX5P35711 763 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 KIZQ2M2Z5 673 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 MBLAC2Q68D91 279 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 WWC2Q6AWC2 1192 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 KCNT2Q6UVM3 1135 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 LBX2Q6XYB7 198 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 NOL8Q76FK4 1167 aaKnown RBP5.94□□□□□ -1.46
XRN1-213ENST00000489241 FERMT3Q86UX7 667 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 LRRTM3Q86VH5 581 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.94□□□□□ -1.46
XRN1-213ENST00000489241 SLC7A14Q8TBB6 771 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 TMEM169Q96HH4 297 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 ALG1Q9BT22 464 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 RXFP1Q9HBX9 757 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 TRIM39Q9HCM9 518 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 HOMER2Q9NSB8 354 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 INTS7Q9NVH2 962 aaKnown RBP5.94□□□□□ -1.46
XRN1-213ENST00000489241 BTG4Q9NY30 223 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 MARCH2Q9P0N8 246 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 MAGEC2Q9UBF1 373 aaPredicted RBP5.94□□□□□ -1.46
XRN1-213ENST00000489241 SFMBT1Q9UHJ3 866 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 MAPRE3Q9UPY8 281 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 TRAF6Q9Y4K3 522 aa5.94□□□□□ -1.46
XRN1-213ENST00000489241 FUCA1P04066 466 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 LCP1P13796 627 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 BCL6P41182 706 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 NFKB2Q00653 900 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 CT47A1Q5JQC4 288 aaPredicted RBP5.93□□□□□ -1.46
XRN1-213ENST00000489241 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 MTDHQ86UE4 582 aaKnown RBP5.93□□□□□ -1.46
XRN1-213ENST00000489241 GSTCDQ8NEC7 633 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 CPA5Q8WXQ8 436 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 DDX1Q92499 740 aaKnown RBP5.93□□□□□ -1.46
XRN1-213ENST00000489241 TRMT2BQ96GJ1 504 aaKnown RBP5.93□□□□□ -1.46
XRN1-213ENST00000489241 MAGEB10Q96LZ2 347 aaPredicted RBP5.93□□□□□ -1.46
XRN1-213ENST00000489241 BCAS3Q9H6U6 928 aa5.93□□□□□ -1.46
XRN1-213ENST00000489241 G3BP2Q9UN86 482 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms