RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 METTL7BQ6UX53 244 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 NFXL1Q6ZNB6 911 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 SMARCC2Q8TAQ2 1214 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 MYL10Q9BUA6 226 aa17.67■□□□□ 0.42
TRIM50-203ENST00000488217 MEIS2O14770 477 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 FIBPO43427 364 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 LGALS2P05162 132 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 SMIM10L2AP0DMW4 78 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 SMIM10L2BP0DMW5 78 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 GRB10Q13322 594 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 KRT40Q6A162 431 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 SRBD1Q8N5C6 995 aaKnown RBP17.66■□□□□ 0.42
TRIM50-203ENST00000488217 DBF4BQ8NFT6 615 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 GPR20Q99678 358 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 SENP7Q9BQF6 1050 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 SEC63Q9UGP8 760 aaKnown RBP17.66■□□□□ 0.42
TRIM50-203ENST00000488217 FRMPD4Q14CM0 1322 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 EMSYQ7Z589 1322 aa17.66■□□□□ 0.42
TRIM50-203ENST00000488217 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 TREHO43280 583 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 LPXNO60711 386 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 GNAT1P11488 350 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 HOXC8P31273 242 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 LIFRP42702 1097 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 TFF2Q03403 129 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 SEMA3FQ13275 785 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 PCNX4Q63HM2 1172 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRIM50-203ENST00000488217 NLRX1Q86UT6 975 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 UHRF1Q96T88 793 aaPredicted RBP17.65■□□□□ 0.42
TRIM50-203ENST00000488217 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
TRIM50-203ENST00000488217 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 SETD4Q9NVD3 440 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 LMCD1Q9NZU5 365 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 COG5Q9UP83 839 aa17.65■□□□□ 0.42
TRIM50-203ENST00000488217 SH2B2O14492 632 aaPredicted RBP17.64■□□□□ 0.41
TRIM50-203ENST00000488217 SLC27A2O14975 620 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 CALM1P0DP23 149 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 CALM2P0DP24 149 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 CALM3P0DP25 149 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 ERVK-21P61565 698 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 NECTIN1Q15223 517 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 PLEKHG4Q58EX7 1191 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 SPRED2Q7Z698 418 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 CMTR1Q8N1G2 835 aaKnown RBP17.64■□□□□ 0.41
TRIM50-203ENST00000488217 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
TRIM50-203ENST00000488217 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 INSL6Q9Y581 213 aa17.64■□□□□ 0.41
TRIM50-203ENST00000488217 PLEKHA8P1O95397 391 aa17.63■□□□□ 0.41
TRIM50-203ENST00000488217 AMHP03971 560 aa17.63■□□□□ 0.41
TRIM50-203ENST00000488217 UTP14CQ5TAP6 766 aaKnown RBP17.63■□□□□ 0.41
TRIM50-203ENST00000488217 FAM117BQ6P1L5 589 aa17.63■□□□□ 0.41
TRIM50-203ENST00000488217 FANCBQ8NB91 859 aa17.63■□□□□ 0.41
TRIM50-203ENST00000488217 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
TRIM50-203ENST00000488217 TELO2Q9Y4R8 837 aa17.63■□□□□ 0.41
TRIM50-203ENST00000488217 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
TRIM50-203ENST00000488217 MYO9BQ13459 2157 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 RBAK-RBAKDNI3L0D1 243 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 CAND2O75155 1236 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 CREB3L3Q68CJ9 461 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 CCDC82Q8N4S0 544 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 SEPT8Q92599 483 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 HLA-CQ95604 372 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 ESYT1Q9BSJ8 1104 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
TRIM50-203ENST00000488217 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
TRIM50-203ENST00000488217 LINC01553A4QN01 128 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 ATP9AO75110 1047 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 RXRAP19793 462 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 KCNQ1P51787 676 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 COL9A3Q14050 684 aaPredicted RBP17.61■□□□□ 0.41
TRIM50-203ENST00000488217 CDHR1Q96JP9 859 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 MTUS1Q9ULD2 1270 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 REV3LO60673 3130 aa17.61■□□□□ 0.41
TRIM50-203ENST00000488217 MAFGO15525 162 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 ITGB5P18084 799 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 ADAM17P78536 824 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 HTRA4P83105 476 aaPredicted RBP17.6■□□□□ 0.41
TRIM50-203ENST00000488217 SP4Q02446 784 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 MKRN4PQ13434 485 aaPredicted RBP17.6■□□□□ 0.41
TRIM50-203ENST00000488217 FAM26DQ5JW98 314 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 SYNE3Q6ZMZ3 975 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 MYOCDQ8IZQ8 938 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 SEPT1Q8WYJ6 367 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 TOP1MTQ969P6 601 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 GPRASP2Q96D09 838 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 NECAB3Q96P71 396 aaPredicted RBP17.6■□□□□ 0.41
TRIM50-203ENST00000488217 OSBPL7Q9BZF2 842 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 NRCAMQ92823 1304 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 LAMA4Q16363 1823 aa17.6■□□□□ 0.41
TRIM50-203ENST00000488217 TRANK1O15050 2925 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 SCN5AQ14524 2016 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 GSTTP1A0A1W2PQM5 241 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 hCG_1642624A0A1W2PR95 340 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 TCF7P36402 384 aaPredicted RBP17.59■□□□□ 0.41
TRIM50-203ENST00000488217 ARHGAP4P98171 946 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 TRIM50Q86XT4 487 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 LRRC2Q9BYS8 371 aa17.59■□□□□ 0.41
TRIM50-203ENST00000488217 ANO2Q9NQ90 1003 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms