RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 ARHGAP36Q6ZRI8 547 aa7.69□□□□□ -1.18
USP48-209ENST00000487880 OSTM1Q86WC4 334 aa7.69□□□□□ -1.18
USP48-209ENST00000487880 PPM1KQ8N3J5 372 aa7.69□□□□□ -1.18
USP48-209ENST00000487880 FBXO15Q8NCQ5 510 aaPredicted RBP7.69□□□□□ -1.18
USP48-209ENST00000487880 MTFR1LQ9H019 292 aa7.69□□□□□ -1.18
USP48-209ENST00000487880 CNTD2Q9H8S5 307 aa7.69□□□□□ -1.18
USP48-209ENST00000487880 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP48-209ENST00000487880 SRPK3Q9UPE1 567 aa7.69□□□□□ -1.18
USP48-209ENST00000487880 CBX4O00257 560 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 MAN2B1O00754 1011 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 PDE8AO60658 829 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 FIGNQ5HY92 759 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 PIK3R6Q5UE93 754 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 CNNM4Q6P4Q7 775 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 UBE2R2Q712K3 238 aaPredicted RBP7.68□□□□□ -1.18
USP48-209ENST00000487880 OTOP1Q7RTM1 612 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 RNF180Q86T96 592 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 CISD2Q8N5K1 135 aaKnown RBP7.68□□□□□ -1.18
USP48-209ENST00000487880 TTLL11Q8NHH1 800 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 BCAS3Q9H6U6 928 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 GCM1Q9NP62 436 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 MAPRE3Q9UPY8 281 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 TELO2Q9Y4R8 837 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 PCDHA5Q9Y5H7 936 aa7.68□□□□□ -1.18
USP48-209ENST00000487880 M0R2C6 588 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 TRAF5O00463 557 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 SLC27A2O14975 620 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 ASGR2P07307 311 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 PMLP29590 882 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 STAT3P40763 770 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 CDR1P51861 262 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 CFAP100Q494V2 611 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 PTRH1Q86Y79 214 aaKnown RBP7.67□□□□□ -1.18
USP48-209ENST00000487880 KIF18BQ86Y91 864 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 TRIM48Q8IWZ4 208 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 ARRDC4Q8NCT1 418 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 CPA5Q8WXQ8 436 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 ALG3Q92685 438 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 RNF38Q9H0F5 515 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 SIRT5Q9NXA8 310 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 NUB1Q9Y5A7 615 aa7.67□□□□□ -1.18
USP48-209ENST00000487880 YBX3P16989 372 aaKnown RBP eCLIP7.66□□□□□ -1.18
USP48-209ENST00000487880 TUSC3Q13454 348 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 LDHDQ86WU2 507 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 NOSTRINQ8IVI9 506 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 FAM126BQ8IXS8 530 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 CHST14Q8NCH0 376 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 CLEC4DQ8WXI8 215 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 WNK4Q96J92 1243 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 FMNL2Q96PY5 1086 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 CD244Q9BZW8 370 aa7.66□□□□□ -1.18
USP48-209ENST00000487880 KPNA6O60684 536 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 LTFP02788 710 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 KRT15P19012 456 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 IGFBP6P24592 240 aaPredicted RBP7.65□□□□□ -1.18
USP48-209ENST00000487880 NEK4P51957 841 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 PCBP1Q15365 356 aaKnown RBP eCLIP7.65□□□□□ -1.18
USP48-209ENST00000487880 SEPT7Q16181 437 aaKnown RBP7.65□□□□□ -1.18
USP48-209ENST00000487880 FSTL4Q6MZW2 842 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 PKN3Q6P5Z2 889 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 KRT26Q7Z3Y9 468 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.65□□□□□ -1.18
USP48-209ENST00000487880 IGDCC3Q8IVU1 814 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 RBM12BQ8IXT5 1001 aaKnown RBP7.65□□□□□ -1.18
USP48-209ENST00000487880 NLGN4XQ8N0W4 816 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 AHI1Q8N157 1196 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 MZB1Q8WU39 189 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 HSPBP1Q9NZL4 362 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 B4GALT6Q9UBX8 382 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
USP48-209ENST00000487880 N4BP3O15049 544 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 MED14OSP0DP75 135 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 EPHB3P54753 998 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 DLG4P78352 724 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 TARBP2Q15633 366 aaKnown RBP7.64□□□□□ -1.19
USP48-209ENST00000487880 ARHGAP44Q17R89 818 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 OGFOD2Q6N063 350 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 ETV3LQ6ZN32 361 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 POU5F2Q8N7G0 328 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 SGPP1Q9BX95 441 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 CAAP1Q9H8G2 361 aa7.64□□□□□ -1.19
USP48-209ENST00000487880 CLASP2O75122 1294 aaKnown RBP7.63□□□□□ -1.19
USP48-209ENST00000487880 F2P00734 622 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 KRT1P04264 644 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 ZBTB48P10074 688 aaPredicted RBP7.63□□□□□ -1.19
USP48-209ENST00000487880 NCAM1P13591 858 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 ATF2P15336 505 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 GLDCP23378 1020 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 CACNB2Q08289 660 aaPredicted RBP7.63□□□□□ -1.19
USP48-209ENST00000487880 SEC23AQ15436 765 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 C2orf69Q8N8R5 385 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 FAM84AQ96KN4 292 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 SPC25Q9HBM1 224 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 CABP5Q9NP86 173 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 DTLQ9NZJ0 730 aa7.63□□□□□ -1.19
USP48-209ENST00000487880 SLC12A8A0AV02 714 aa7.62□□□□□ -1.19
USP48-209ENST00000487880 FAM90A27PA6NNH2 459 aa7.62□□□□□ -1.19
USP48-209ENST00000487880 ACOT7O00154 380 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms