RNA–Protein interactions for RNA: ENST00000486845.1

PHF1-208, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-208ENST00000486845 SMIM10L2AP0DMW4 78 aa23.23■■□□□ 1.31
PHF1-208ENST00000486845 SMIM10L2BP0DMW5 78 aa23.23■■□□□ 1.31
PHF1-208ENST00000486845 HOXD11P31277 338 aaPredicted RBP23.23■■□□□ 1.31
PHF1-208ENST00000486845 FCHSD1Q86WN1 690 aa23.23■■□□□ 1.31
PHF1-208ENST00000486845 FAM178BQ8IXR5 827 aa23.23■■□□□ 1.31
PHF1-208ENST00000486845 C11orf16Q9NQ32 467 aa23.23■■□□□ 1.31
PHF1-208ENST00000486845 NOP56O00567 594 aaKnown RBP23.22■■□□□ 1.31
PHF1-208ENST00000486845 LGALS2P05162 132 aa23.22■■□□□ 1.31
PHF1-208ENST00000486845 GNPTABQ3T906 1256 aa23.22■■□□□ 1.31
PHF1-208ENST00000486845 TIGD5Q53EQ6 642 aa23.22■■□□□ 1.31
PHF1-208ENST00000486845 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.22■■□□□ 1.31
PHF1-208ENST00000486845 GPKOWQ92917 476 aaPredicted RBP eCLIP23.22■■□□□ 1.315e-9■■■■□ 21.7
PHF1-208ENST00000486845 YME1L1Q96TA2 773 aa23.22■■□□□ 1.31
PHF1-208ENST00000486845 FAM86C2PA6NEL3 165 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 TREHO43280 583 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 GNAT1P11488 350 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 TRDNQ13061 729 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 GRM4Q14833 912 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 PUS10Q3MIT2 529 aaKnown RBP23.21■■□□□ 1.31
PHF1-208ENST00000486845 EPC2Q52LR7 807 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 CYB5R4Q7L1T6 521 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 GJD3Q8N144 294 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 ZFP91Q96JP5 570 aaPredicted RBP23.21■■□□□ 1.31
PHF1-208ENST00000486845 PIGSQ96S52 555 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 USP26Q9BXU7 913 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 RIOX1Q9H6W3 641 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 COL4A6Q14031 1691 aa23.21■■□□□ 1.31
PHF1-208ENST00000486845 RBAK-RBAKDNI3L0D1 243 aa23.2■■□□□ 1.3
PHF1-208ENST00000486845 STAM2O75886 525 aa23.2■■□□□ 1.3
PHF1-208ENST00000486845 NEDD9Q14511 834 aa23.2■■□□□ 1.3
PHF1-208ENST00000486845 PTCRAQ6ISU1 281 aaPredicted RBP23.2■■□□□ 1.3
PHF1-208ENST00000486845 TOP1MTQ969P6 601 aa23.2■■□□□ 1.3
PHF1-208ENST00000486845 RNPEPQ9H4A4 650 aa23.2■■□□□ 1.3
PHF1-208ENST00000486845 FRMPD4Q14CM0 1322 aa23.19■■□□□ 1.3
PHF1-208ENST00000486845 PNMA6FA0A0J9YX94 578 aa23.19■■□□□ 1.3
PHF1-208ENST00000486845 CTSHP09668 335 aa23.19■■□□□ 1.3
PHF1-208ENST00000486845 SSTR3P32745 418 aaPredicted RBP23.19■■□□□ 1.3
PHF1-208ENST00000486845 ICAM3P32942 547 aa23.19■■□□□ 1.3
PHF1-208ENST00000486845 SLC35G1Q2M3R5 365 aa23.19■■□□□ 1.3
PHF1-208ENST00000486845 METTL7BQ6UX53 244 aa23.19■■□□□ 1.3
PHF1-208ENST00000486845 INPP4AQ96PE3 977 aaPredicted RBP23.19■■□□□ 1.3
PHF1-208ENST00000486845 H3BNC9 293 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 IL9P15248 144 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 GPM6BQ13491 265 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 BANK1Q8NDB2 785 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 NEK9Q8TD19 979 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 APBB2Q92870 758 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 BCAS3Q9H6U6 928 aa23.18■■□□□ 1.3
PHF1-208ENST00000486845 ZNF215Q9UL58 517 aaPredicted RBP23.18■■□□□ 1.3
PHF1-208ENST00000486845 BAZ2BQ9UIF8 2168 aaKnown RBP23.18■■□□□ 1.3
PHF1-208ENST00000486845 ERICH2A1L162 156 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 GRXCR2A6NFK2 248 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 SPATA31C2B4DYI2 1134 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 IFIT3O14879 490 aaKnown RBP23.17■■□□□ 1.3
PHF1-208ENST00000486845 FIBPO43427 364 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 UPP2O95045 317 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 IGHDP01880 384 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 MRPS9P82933 396 aaKnown RBP23.17■■□□□ 1.3
PHF1-208ENST00000486845 CYFIP1Q7L576 1253 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 TMEM192Q8IY95 271 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 GPR20Q99678 358 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 IFIH1Q9BYX4 1025 aaKnown RBP23.17■■□□□ 1.3
PHF1-208ENST00000486845 SETD4Q9NVD3 440 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 NLRC5Q86WI3 1866 aa23.17■■□□□ 1.3
PHF1-208ENST00000486845 RALGAPA2Q2PPJ7 1873 aa23.16■■□□□ 1.3
PHF1-208ENST00000486845 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.16■■□□□ 1.3
PHF1-208ENST00000486845 CYTH3O43739 400 aa23.16■■□□□ 1.3
PHF1-208ENST00000486845 IL25Q9H293 177 aa23.16■■□□□ 1.3
PHF1-208ENST00000486845 FAM50BQ9Y247 325 aa23.16■■□□□ 1.3
PHF1-208ENST00000486845 U3KPZ7 1027 aaPredicted RBP23.16■■□□□ 1.3
PHF1-208ENST00000486845 PRR33A8MZF0 331 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 ALADP13716 330 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 SEMA3FQ13275 785 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 SART3Q15020 963 aaKnown RBP23.15■■□□□ 1.3
PHF1-208ENST00000486845 TCEAL5Q5H9L2 206 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 FAM26DQ5JW98 314 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 TRIM50Q86XT4 487 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 PABPC5Q96DU9 382 aaKnown RBP23.15■■□□□ 1.3
PHF1-208ENST00000486845 OSBPL7Q9BZF2 842 aa23.15■■□□□ 1.3
PHF1-208ENST00000486845 NSUN3Q9H649 340 aaKnown RBP23.15■■□□□ 1.3
PHF1-208ENST00000486845 DOCK5Q9H7D0 1870 aa23.14■■□□□ 1.29
PHF1-208ENST00000486845 H3BQ06 376 aaPredicted RBP23.14■■□□□ 1.29
PHF1-208ENST00000486845 ARHGAP4P98171 946 aa23.14■■□□□ 1.29
PHF1-208ENST00000486845 TROAPQ12815 778 aa23.14■■□□□ 1.29
PHF1-208ENST00000486845 WTAPQ15007 396 aa23.14■■□□□ 1.29
PHF1-208ENST00000486845 RALYLQ86SE5 291 aaKnown RBP23.14■■□□□ 1.29
PHF1-208ENST00000486845 MUC6Q6W4X9 2439 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 ADAM17P78536 824 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 COL19A1Q14993 1142 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 UTP14CQ5TAP6 766 aaKnown RBP23.13■■□□□ 1.29
PHF1-208ENST00000486845 XRRA1Q6P2D8 792 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 CATIPQ7Z7H3 387 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 LMBR1Q8WVP7 490 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 IL17RAQ96F46 866 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 SENP7Q9BQF6 1050 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 RTEL1Q9NZ71 1219 aa23.13■■□□□ 1.29
PHF1-208ENST00000486845 NRCAMQ92823 1304 aa23.12■■□□□ 1.29
PHF1-208ENST00000486845 PIEZO1Q92508 2521 aa23.12■■□□□ 1.29
PHF1-208ENST00000486845 CYP21A2P08686 494 aa23.12■■□□□ 1.29
PHF1-208ENST00000486845 PCNX4Q63HM2 1172 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms