RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 SPATA33Q96N06 139 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 COL4A6Q14031 1691 aa15.31■□□□□ 0.04
UBA3-210ENST00000485424 HAS3O00219 553 aa15.3■□□□□ 0.04
UBA3-210ENST00000485424 PARNO95453 639 aaKnown RBP15.3■□□□□ 0.04
UBA3-210ENST00000485424 GGPS1O95749 300 aa15.3■□□□□ 0.04
UBA3-210ENST00000485424 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
UBA3-210ENST00000485424 WNT8BQ93098 351 aa15.3■□□□□ 0.04
UBA3-210ENST00000485424 RRP36Q96EU6 259 aaKnown RBP15.3■□□□□ 0.04
UBA3-210ENST00000485424 TTC3P53804 2025 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
UBA3-210ENST00000485424 RGS20O76081 388 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 DDAH1O94760 285 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 TGFB3P10600 412 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 HOXD8P13378 290 aaPredicted RBP15.29■□□□□ 0.04
UBA3-210ENST00000485424 MCM5P33992 734 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 GNAQP50148 359 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 TROAPQ12815 778 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 TRIM71Q2Q1W2 868 aaKnown RBP15.29■□□□□ 0.04
UBA3-210ENST00000485424 CELF3Q5SZQ8 465 aaKnown RBP15.29■□□□□ 0.04
UBA3-210ENST00000485424 TRAF7Q6Q0C0 670 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 VSIG10LQ86VR7 867 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 MB21D2Q8IYB1 491 aaPredicted RBP15.29■□□□□ 0.04
UBA3-210ENST00000485424 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 TMTC2Q8N394 836 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 GDPD5Q8WTR4 605 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 SENP2Q9HC62 589 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 COG5Q9UP83 839 aa15.29■□□□□ 0.04
UBA3-210ENST00000485424 PRC1O43663 620 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 CYTH3O43739 400 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 PPFIA4O75335 1185 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 STAM2O75886 525 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 CALM1P0DP23 149 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 CALM2P0DP24 149 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 CALM3P0DP25 149 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 PTK7Q13308 1070 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 MBTPS1Q14703 1052 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 MYSM1Q5VVJ2 828 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 IL31RAQ8NI17 732 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 IGDCC4Q8TDY8 1250 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 ZFP91Q96JP5 570 aaPredicted RBP15.28■□□□□ 0.04
UBA3-210ENST00000485424 TMEM87BQ96K49 555 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 MAP3K14Q99558 947 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 LZTS2Q9BRK4 669 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 PLXNA4Q9HCM2 1894 aa15.28■□□□□ 0.04
UBA3-210ENST00000485424 GJB5O95377 273 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 UBA1P22314 1058 aaKnown RBP15.27■□□□□ 0.04
UBA3-210ENST00000485424 ANTXR2P58335 489 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 ZNF200P98182 395 aaPredicted RBP15.27■□□□□ 0.04
UBA3-210ENST00000485424 HIC1Q14526 733 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 ZNF618Q5T7W0 954 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 MYL10Q9BUA6 226 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 SPZ1Q9BXG8 430 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 LY9Q9HBG7 655 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 ANO2Q9NQ90 1003 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.04
UBA3-210ENST00000485424 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.03
UBA3-210ENST00000485424 ABHD14A-ACY1A0A1B0GW23 586 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 EFCAB14O75071 495 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 SP2Q02086 613 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 NEDD9Q14511 834 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 SLC35G1Q2M3R5 365 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 RNF20Q5VTR2 975 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 GPKOWQ92917 476 aaPredicted RBP eCLIP15.26■□□□□ 0.03
UBA3-210ENST00000485424 HLA-CQ95604 372 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 RTEL1Q9NZ71 1219 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 MUC6Q6W4X9 2439 aa15.26■□□□□ 0.03
UBA3-210ENST00000485424 WDFY4Q6ZS81 3184 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 C17orf102A2RUQ5 167 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 LINC01553A4QN01 128 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 H3BRB1 525 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 FIBPO43427 364 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 SMARCA1P28370 1054 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 ERVK-21P61565 698 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 IKBKEQ14164 716 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 NLRX1Q86UT6 975 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 SERINC5Q86VE9 423 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 TGS1Q96RS0 853 aaKnown RBP15.25■□□□□ 0.03
UBA3-210ENST00000485424 RAD9AQ99638 391 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 ESYT1Q9BSJ8 1104 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 TUT1Q9H6E5 874 aaKnown RBP15.25■□□□□ 0.03
UBA3-210ENST00000485424 LMCD1Q9NZU5 365 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 SLC12A7Q9Y666 1083 aa15.25■□□□□ 0.03
UBA3-210ENST00000485424 FRMPD4Q14CM0 1322 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 EMSYQ7Z589 1322 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 SH2B2O14492 632 aaPredicted RBP15.24■□□□□ 0.03
UBA3-210ENST00000485424 SLC27A2O14975 620 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 LGR5O75473 907 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 GNAT1P11488 350 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 THPOP40225 353 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 CREB3L3Q68CJ9 461 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 FAM117BQ6P1L5 589 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 ATP6V0A1Q93050 837 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 C16orf70Q9BSU1 422 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 C1QTNF1Q9BXJ1 281 aa15.24■□□□□ 0.03
UBA3-210ENST00000485424 USP26Q9BXU7 913 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms