RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 BANK1Q8NDB2 785 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 NEK9Q8TD19 979 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 SEPT8Q92599 483 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
CSDE1-206ENST00000483030 TOP1MTQ969P6 601 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 C16orf70Q9BSU1 422 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 OSBPL7Q9BZF2 842 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 LNPKQ9C0E8 428 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 BCAS3Q9H6U6 928 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 MLXIPQ9HAP2 919 aa8.59□□□□□ -1.03
CSDE1-206ENST00000483030 C17orf102A2RUQ5 167 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 KLRF2D3W0D1 207 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 H3BNC9 293 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 H3BRB1 525 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 TREHO43280 583 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 PPP1R11O60927 126 aaPredicted RBP8.58□□□□□ -1.04
CSDE1-206ENST00000483030 CTSHP09668 335 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 TGFB3P10600 412 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 NT5C2P49902 561 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 GPM6BQ13491 265 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 PGM5Q15124 567 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 TCEAL5Q5H9L2 206 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 TMEM192Q8IY95 271 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 IL31RAQ8NI17 732 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 SAMD11Q96NU1 681 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 YME1L1Q96TA2 773 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 UBAC1Q9BSL1 405 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 RNPEPQ9H4A4 650 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 TUT1Q9H6E5 874 aaKnown RBP8.58□□□□□ -1.04
CSDE1-206ENST00000483030 PCDHA1Q9Y5I3 950 aa8.58□□□□□ -1.04
CSDE1-206ENST00000483030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 POTEB3A0JP26 581 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 GCOM1H8Y6P7 765 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 ZBTB5O15062 677 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 DCXO43602 365 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 LGALS2P05162 132 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 POLR2MP0CAP2 368 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 UBA1P22314 1058 aaKnown RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 CCND2P30279 289 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 GHRHRQ02643 423 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 HDAC1Q13547 482 aaPredicted RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 IMMTQ16891 758 aaKnown RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 IFIT1BQ5T764 474 aaKnown RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 POTEBQ6S5H4 581 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 HOMER1Q86YM7 354 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 PABPC5Q96DU9 382 aaKnown RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 MTMR8Q96EF0 704 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 IFIH1Q9BYX4 1025 aaKnown RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 KRT23Q9C075 422 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 SETD4Q9NVD3 440 aa8.57□□□□□ -1.04
CSDE1-206ENST00000483030 MAP3K20Q9NYL2 800 aaKnown RBP8.57□□□□□ -1.04
CSDE1-206ENST00000483030 TRIP12Q14669 1992 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-206ENST00000483030 PALM3A6NDB9 673 aaPredicted RBP8.56□□□□□ -1.04
CSDE1-206ENST00000483030 NOP56O00567 594 aaKnown RBP8.56□□□□□ -1.04
CSDE1-206ENST00000483030 GNAT1P11488 350 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 HOXC8P31273 242 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 ZP2Q05996 745 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 SLC35G1Q2M3R5 365 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 CYFIP1Q7L576 1253 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 SAMD3Q8N6K7 520 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 DSCC1Q9BVC3 393 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 USP26Q9BXU7 913 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 NSUN3Q9H649 340 aaKnown RBP8.56□□□□□ -1.04
CSDE1-206ENST00000483030 DIAPH3Q9NSV4 1193 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 RTEL1Q9NZ71 1219 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 MAD2L2Q9UI95 211 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 FAM50BQ9Y247 325 aa8.56□□□□□ -1.04
CSDE1-206ENST00000483030 BRWD1Q9NSI6 2320 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 TANC1Q9C0D5 1861 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 SPATA31C2B4DYI2 1134 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 CAND2O75155 1236 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 BMPR1AP36894 532 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 LTBRP36941 435 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 MRE11P49959 708 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 RRP1P56182 461 aaKnown RBP8.55□□□□□ -1.04
CSDE1-206ENST00000483030 MRPS9P82933 396 aaKnown RBP8.55□□□□□ -1.04
CSDE1-206ENST00000483030 NEDD9Q14511 834 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 COL19A1Q14993 1142 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 SEC23AQ15436 765 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 GNPTABQ3T906 1256 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 UTP14CQ5TAP6 766 aaKnown RBP8.55□□□□□ -1.04
CSDE1-206ENST00000483030 METTL7BQ6UX53 244 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 CYB5R4Q7L1T6 521 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 FBXL18Q96ME1 805 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 PIGSQ96S52 555 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 GPR20Q99678 358 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 RIOX1Q9H6W3 641 aa8.55□□□□□ -1.04
CSDE1-206ENST00000483030 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms