RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 RETREG2Q8NC44 543 aa19.37■□□□□ 0.69
CDKN1A-207ENST00000478800 KAT2BQ92831 832 aa19.37■□□□□ 0.69
CDKN1A-207ENST00000478800 MXRA8Q9BRK3 442 aa19.37■□□□□ 0.69
CDKN1A-207ENST00000478800 SH3GLB2Q9NR46 395 aa19.37■□□□□ 0.69
CDKN1A-207ENST00000478800 PKD2L1Q9P0L9 805 aa19.37■□□□□ 0.69
CDKN1A-207ENST00000478800 LAMA3Q16787 3333 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 HOXD8P13378 290 aaPredicted RBP19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 CSF2RAP15509 400 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 CCL23P55773 120 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 CCDC155Q8N6L0 562 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 RNPC3Q96LT9 517 aaKnown RBP19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 GPR20Q99678 358 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 NOC4LQ9BVI4 516 aaKnown RBP19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 ZNF215Q9UL58 517 aaPredicted RBP19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 TPCN1Q9ULQ1 816 aa19.36■□□□□ 0.69
CDKN1A-207ENST00000478800 H3BRB1 525 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 LGALS2P05162 132 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 ARHGAP4P98171 946 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 SCRN1Q12765 414 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 BFSP2Q13515 415 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 CEP55Q53EZ4 464 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 C9orf50Q5SZB4 431 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 UTP14CQ5TAP6 766 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 IL17RAQ96F46 866 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 SDF4Q9BRK5 362 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 TUT1Q9H6E5 874 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 BCAS3Q9H6U6 928 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 HDAC6Q9UBN7 1215 aa19.35■□□□□ 0.69
CDKN1A-207ENST00000478800 PFKFB2O60825 505 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 ATP9AO75110 1047 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 KCNA2P16389 499 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 XBP1P17861 261 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 GDF6Q6KF10 455 aaPredicted RBP19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 RPUSD2Q8IZ73 545 aaKnown RBP19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 C16orf70Q9BSU1 422 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 KCNH7Q9NS40 1196 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 GTF2IRD1Q9UHL9 959 aa19.34■□□□□ 0.69
CDKN1A-207ENST00000478800 LTBP2Q14767 1821 aa19.33■□□□□ 0.69
CDKN1A-207ENST00000478800 HAS3O00219 553 aa19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 EPHB4P54760 987 aa19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 C8orf34Q49A92 452 aa19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 PSRC1Q6PGN9 363 aaPredicted RBP19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 SEPT1Q8WYJ6 367 aa19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 LRCH3Q96II8 777 aa19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 UPF2Q9HAU5 1272 aaKnown RBP19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 JPH1Q9HDC5 661 aaPredicted RBP19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 IL23AQ9NPF7 189 aa19.33■□□□□ 0.68
CDKN1A-207ENST00000478800 UMODL1Q5DID0 1318 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 SOX1O00570 391 aaPredicted RBP19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 TCF7P36402 384 aaPredicted RBP19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 NIPA1Q7RTP0 329 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 PLA2G4DQ86XP0 818 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 FAM177A1Q8N128 213 aaPredicted RBP19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 CYP2W1Q8TAV3 490 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 CAGE1Q8TC20 777 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 WASF1Q92558 559 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 C22orf23Q9BZE7 217 aa19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 MTIF3Q9H2K0 278 aaKnown RBP19.32■□□□□ 0.68
CDKN1A-207ENST00000478800 C17orf102A2RUQ5 167 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 MEIS1O00470 390 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 PITPNM1O00562 1244 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 CYP3A4P08684 503 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 ARP10275 920 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 ACRP10323 421 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 GNAT1P11488 350 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 GALNT17Q6IS24 598 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 RASGRP4Q8TDF6 673 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 GLG1Q92896 1179 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 SCLYQ96I15 445 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.31■□□□□ 0.681e-17■■□□□ 11.8
CDKN1A-207ENST00000478800 WNT8AQ9H1J5 351 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 AZI2Q9H6S1 392 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 AGO4Q9HCK5 861 aaKnown RBP19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 SLC9A2Q9UBY0 812 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 TCEAL9Q9UHQ7 104 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 PCDHA4Q9UN74 947 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 SCN10AQ9Y5Y9 1956 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 COL6A3P12111 3177 aa19.31■□□□□ 0.68
CDKN1A-207ENST00000478800 NFASCO94856 1347 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 STK36Q9NRP7 1315 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 FGBP02675 491 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 RFC2P35250 354 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 SETQ01105 290 aaPredicted RBP19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 PTK7Q13308 1070 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 ZNF365Q70YC5 407 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 BLIDQ8IZY5 108 aa19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 ORC3Q9UBD5 711 aaPredicted RBP19.3■□□□□ 0.68
CDKN1A-207ENST00000478800 FAM86B1E9PN63 330 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 PFKMP08237 780 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 FAM86B2P0C5J1 330 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 SMIM10L2AP0DMW4 78 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 SMIM10L2BP0DMW5 78 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 ME3Q16798 604 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 TMEM240Q5SV17 173 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 GPR153Q6NV75 609 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 DEFB128Q7Z7B8 93 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 NECAB1Q8N987 351 aa19.29■□□□□ 0.68
CDKN1A-207ENST00000478800 AFAP1L1Q8TED9 768 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms