RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 TTC3P53804 2025 aa18.51■□□□□ 0.55
ITGB1-211ENST00000475184 CTSHP09668 335 aa18.51■□□□□ 0.55
ITGB1-211ENST00000475184 PARP1P09874 1014 aaKnown RBP18.51■□□□□ 0.55
ITGB1-211ENST00000475184 UBA1P22314 1058 aaKnown RBP18.51■□□□□ 0.55
ITGB1-211ENST00000475184 PDE1AP54750 535 aa18.51■□□□□ 0.55
ITGB1-211ENST00000475184 GHRHRQ02643 423 aa18.51■□□□□ 0.55
ITGB1-211ENST00000475184 HFE2Q6ZVN8 426 aa18.51■□□□□ 0.55
ITGB1-211ENST00000475184 RPAINQ86UA6 219 aa18.51■□□□□ 0.55
ITGB1-211ENST00000475184 CFAP54Q96N23 3096 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.5■□□□□ 0.55
ITGB1-211ENST00000475184 H3BRB1 525 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 TREHO43280 583 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 NCK2O43639 380 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 CAND2O75155 1236 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 KDM4AO75164 1064 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 SMIM10L2AP0DMW4 78 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 SMIM10L2BP0DMW5 78 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 IRS1P35568 1242 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 LTBRP36941 435 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 NT5C2P49902 561 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 SP2Q02086 613 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 ANKRD45Q5TZF3 282 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 STOX1Q6ZVD7 989 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 ANKS1AQ92625 1134 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 AMNQ9BXJ7 453 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 OSBPL7Q9BZF2 842 aa18.5■□□□□ 0.55
ITGB1-211ENST00000475184 TUT1Q9H6E5 874 aaKnown RBP18.5■□□□□ 0.55
ITGB1-211ENST00000475184 KIAA1671Q9BY89 1806 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 ZNF213O14771 459 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 TGFB3P10600 412 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 CTNNB1P35222 781 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 PGM5Q15124 567 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 VSIG10LQ86VR7 867 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-211ENST00000475184 IL31RAQ8NI17 732 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 APBB2Q92870 758 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 ZSCAN10Q96SZ4 725 aaPredicted RBP18.49■□□□□ 0.55
ITGB1-211ENST00000475184 POP1Q99575 1024 aaKnown RBP18.49■□□□□ 0.55
ITGB1-211ENST00000475184 MLXIPQ9HAP2 919 aa18.49■□□□□ 0.55
ITGB1-211ENST00000475184 MAP3K20Q9NYL2 800 aaKnown RBP18.49■□□□□ 0.55
ITGB1-211ENST00000475184 LGALS2P05162 132 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 HOXA13P31271 388 aaPredicted RBP18.48■□□□□ 0.55
ITGB1-211ENST00000475184 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
ITGB1-211ENST00000475184 SMAD2Q15796 467 aaKnown RBP18.48■□□□□ 0.55
ITGB1-211ENST00000475184 CLUL1Q15846 466 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 CTC1Q2NKJ3 1217 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 IL17RAQ96F46 866 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 MFSD14AQ96MC6 490 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 RNPEPQ9H4A4 650 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 LOXHD1Q8IVV2 1947 aa18.48■□□□□ 0.55
ITGB1-211ENST00000475184 TRIM6-TRIM34B2RNG4 842 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 B4E1Z4 1266 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 C5orf67F2Z3F1 127 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 PPP1R11O60927 126 aaPredicted RBP18.47■□□□□ 0.55
ITGB1-211ENST00000475184 CCND2P30279 289 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 FIBCD1Q8N539 461 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 GPKOWQ92917 476 aaPredicted RBP eCLIP18.47■□□□□ 0.552e-6■■■■□ 21.7
ITGB1-211ENST00000475184 C11orf84Q9BUA3 381 aaPredicted RBP18.47■□□□□ 0.55
ITGB1-211ENST00000475184 LMAN2LQ9H0V9 348 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 MUTYHQ9UIF7 546 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 PCDHA1Q9Y5I3 950 aa18.47■□□□□ 0.55
ITGB1-211ENST00000475184 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
ITGB1-211ENST00000475184 RB1P06400 928 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 GNAT1P11488 350 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 DLX2Q07687 328 aaPredicted RBP18.46■□□□□ 0.55
ITGB1-211ENST00000475184 HYAL1Q12794 435 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 HERC4Q5GLZ8 1057 aaPredicted RBP18.46■□□□□ 0.55
ITGB1-211ENST00000475184 DIEXFQ68CQ4 756 aaKnown RBP18.46■□□□□ 0.55
ITGB1-211ENST00000475184 STAG2Q8N3U4 1231 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 ZFP91Q96JP5 570 aaPredicted RBP18.46■□□□□ 0.55
ITGB1-211ENST00000475184 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 RWDD3Q9Y3V2 267 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 SPTBN4Q9H254 2564 aa18.46■□□□□ 0.55
ITGB1-211ENST00000475184 ZBTB5O15062 677 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 GRM6O15303 877 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 MBTPS2O43462 519 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 LINC00271P0C7V0 271 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 BMPR1AP36894 532 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 SMAD4Q13485 552 aaKnown RBP18.45■□□□□ 0.54
ITGB1-211ENST00000475184 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 MTMR8Q96EF0 704 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 USP26Q9BXU7 913 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 BCAS3Q9H6U6 928 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 ZSWIM5Q9P217 1185 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 KMT2EQ8IZD2 1858 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 ADGRA3Q8IWK6 1321 aa18.45■□□□□ 0.54
ITGB1-211ENST00000475184 ZFHX2Q9C0A1 2572 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-211ENST00000475184 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
ITGB1-211ENST00000475184 TBX10O75333 385 aa18.44■□□□□ 0.54
ITGB1-211ENST00000475184 FAM26DQ5JW98 314 aa18.44■□□□□ 0.54
ITGB1-211ENST00000475184 RNF135Q8IUD6 432 aa18.44■□□□□ 0.54
ITGB1-211ENST00000475184 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
ITGB1-211ENST00000475184 UBAC1Q9BSL1 405 aa18.44■□□□□ 0.54
ITGB1-211ENST00000475184 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
ITGB1-211ENST00000475184 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
ITGB1-211ENST00000475184 GNPTABQ3T906 1256 aa18.43■□□□□ 0.54
ITGB1-211ENST00000475184 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
ITGB1-211ENST00000475184 FCHSD1Q86WN1 690 aa18.43■□□□□ 0.54
ITGB1-211ENST00000475184 TRIM50Q86XT4 487 aa18.43■□□□□ 0.54
ITGB1-211ENST00000475184 LMBR1Q8WVP7 490 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms