RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 NDUFA8P51970 172 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 FAM160A1Q05DH4 1040 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 STXBP2Q15833 593 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 NTRK3Q16288 839 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 WWC2Q6AWC2 1192 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 IQSEC1Q6DN90 963 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 KCNV1Q6PIU1 500 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 TRPV1Q8NER1 839 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 U2AF1L4Q8WU68 220 aaKnown RBP4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 PRIMPOLQ96LW4 560 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 RMDN3Q96TC7 470 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 SLC26A6Q9BXS9 759 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 SPC25Q9HBM1 224 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 C6orf50Q9HD87 102 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 PXMP2Q9NR77 195 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 OGDHLQ9ULD0 1010 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 Q9Y3F1 56 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 FRMPD3Q5JV73 1810 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 FRMPD4Q14CM0 1322 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 RBM47A0AV96 593 aaKnown RBP4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 KIF28PB7ZC32 967 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 OPLAHO14841 1288 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 TAL1P17542 331 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 RGS19P49795 217 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 MNX1P50219 401 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 SOX10P56693 466 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 AP3B2Q13367 1082 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 STK38Q15208 465 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 CCDC144BQ3MJ40 725 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 GALNT17Q6IS24 598 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 FMR1NBQ8N0W7 255 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 ARRDC4Q8NCT1 418 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 CACTINQ8WUQ7 758 aaKnown RBP4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 AIFM3Q96NN9 605 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 DEFB118Q96PH6 123 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 TAAR1Q96RJ0 339 aa4.72□□□□□ -1.65
GAPVD1-216ENST00000474637 SMCHD1A6NHR9 2005 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 SMCO2A6NFE2 343 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 SPDYE3A6NKU9 549 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 MEIS2O14770 477 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 SPTLC2O15270 562 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ZEB2O60315 1214 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 DUSP11O75319 330 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 EIF3JO75822 258 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 MYCP01106 439 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 MARCKSP29966 332 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 TNFAIP2Q03169 654 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 TTLL4Q14679 1199 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ARID5BQ14865 1188 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 STX1AQ16623 288 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 MYSM1Q5VVJ2 828 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 LHX8Q68G74 356 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 RNF180Q86T96 592 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 DHX40Q8IX18 779 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 IPO4Q8TEX9 1081 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 SCFD2Q8WU76 684 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 MRPS27Q92552 414 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 TBC1D5Q92609 795 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 GPKOWQ92917 476 aaPredicted RBP eCLIP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PHKBQ93100 1093 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 TSEN34Q9BSV6 310 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 KATNBL1Q9H079 304 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ZMYND12Q9H0C1 365 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 UPF3AQ9H1J1 476 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ANO10Q9NW15 660 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 KIAA1468Q9P260 1216 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ASTN1O14525 1302 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 hCG_1642624A0A1W2PR95 340 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 POTEFA5A3E0 1075 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 KBTBD13C9JR72 458 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 DNM1LO00429 736 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 FARP2O94887 1054 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ZNF202O95125 648 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 NR3C2P08235 984 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 EIF2AK2P19525 551 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 EN2P19622 333 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 HOXA13P31271 388 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 GJA9P57773 515 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 NKX3-2P78367 333 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PGM5Q15124 567 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PKN1Q16512 942 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 BRDTQ58F21 947 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PRAMEF19Q5SWL8 479 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PCNX4Q63HM2 1172 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ISM2Q6H9L7 571 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 TAPT1Q6NXT6 567 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 NLRX1Q86UT6 975 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 FCHSD1Q86WN1 690 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 LRRC8AQ8IWT6 810 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 FBXO16Q8IX29 292 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 DAGLBQ8NCG7 672 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 KCNG4Q8TDN1 519 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 SHISA4Q96DD7 197 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 CDHR1Q96JP9 859 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PDCD2LQ9BRP1 358 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 ALG1Q9BT22 464 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 SEZ6LQ9BYH1 1024 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 AP5M1Q9H0R1 490 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 XPNPEP3Q9NQH7 507 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms