RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 CCDC84Q86UT8 332 aaPredicted RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CCDC13Q8IYE1 715 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 SAMD3Q8N6K7 520 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CCHCR1Q8TD31 782 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 RUNDC1Q96C34 613 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 POLR3CQ9BUI4 534 aaPredicted RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CAPS2Q9BXY5 557 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 KAT14Q9H8E8 782 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ANKZF1Q9H8Y5 726 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 TMEM165Q9HC07 324 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 TRIM33Q9UPN9 1127 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 FRMD4BQ9Y2L6 1034 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 TMEM98Q9Y2Y6 226 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 DAPK1P53355 1430 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 PTCH1Q13635 1447 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 KIAA1210Q9ULL0 1709 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 BECN2A8MW95 431 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 F8VZ95 297 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 ABLIM1O14639 778 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 NME2P22392 152 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 IFT88Q13099 833 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 PABPC4Q13310 644 aaKnown RBP eCLIP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 STX1AQ16623 288 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 RNF168Q8IYW5 571 aaPredicted RBP5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 AFAP1Q8N556 730 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 IGSF22Q8N9C0 903 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 JAKMIP2Q96AA8 810 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 YIPF3Q9GZM5 350 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 CENPHQ9H3R5 247 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 TPCN1Q9ULQ1 816 aa5.72□□□□□ -1.49
TMEM39A-206ENST00000473684 SSH2Q76I76 1423 aa5.71□□□□□ -1.49
TMEM39A-206ENST00000473684 SYF2O95926 243 aaKnown RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 RPL13P26373 211 aaKnown RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 AMPHP49418 695 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 KRT85P78386 507 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 MPP3Q13368 585 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 BLMHQ13867 455 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SLC4A8Q2Y0W8 1093 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 KBTBD12Q3ZCT8 623 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SLITRK4Q8IW52 837 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 FUKQ8N0W3 1084 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 CXorf38Q8TB03 319 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 LZICQ8WZA0 190 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 TTC9Q92623 222 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 CFAP53Q96M91 514 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ZNF408Q9H9D4 720 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 STRIP2Q9ULQ0 834 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 PCDHB5Q9Y5E4 795 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 GMEB1Q9Y692 573 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 EVC2Q86UK5 1308 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ROBO2Q9HCK4 1378 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 PLEKHG1Q9ULL1 1385 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ABCC6O95255 1503 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 THSD7AQ9UPZ6 1657 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ITSN1Q15811 1721 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SRRM3A6NNA2 597 aaPredicted RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 BIN1O00499 593 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 NDUFAB1O14561 156 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SSBP05455 408 aaKnown RBP eCLIP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 RPSAP08865 295 aaKnown RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 GNAT1P11488 350 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 DESP17661 470 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 NFX1Q12986 1120 aaKnown RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 Q4G0T1 1027 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 AKNAD1Q5T1N1 836 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 WDR93Q6P2C0 686 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 BNC2Q6ZN30 1099 aaPredicted RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 GET4Q7L5D6 327 aaPredicted RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ARMC9Q7Z3E5 817 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 FAM228AQ86W67 206 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 CKAP2LQ8IYA6 745 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SMARCC2Q8TAQ2 1214 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SCLT1Q96NL6 688 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ANKRD27Q96NW4 1050 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 LRRC3Q9BY71 257 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ITGB1BP2Q9UKP3 347 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 TPX2Q9ULW0 747 aaKnown RBP5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 CYP8B1Q9UNU6 501 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 ATP8A1Q9Y2Q0 1164 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 SAMM50Q9Y512 469 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 GRIN2DO15399 1336 aa5.71□□□□□ -1.5
TMEM39A-206ENST00000473684 PDHBP11177 359 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 ESRRAP11474 423 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 CNGA1P29973 690 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 MYBPC3Q14896 1274 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 CCDC92Q53HC0 331 aaPredicted RBP5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 NUGGCQ68CJ6 796 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 ARMCX5Q6P1M9 558 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 IQCF2Q8IXL9 164 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 KIRREL3Q8IZU9 778 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 RASSF8Q8NHQ8 419 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 STK35Q8TDR2 534 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 NSMCE1Q8WV22 266 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 GATAD2BQ8WXI9 593 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 NKD1Q969G9 470 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 FAM81BQ96LP2 452 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 RUFY1Q96T51 708 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 MTA3Q9BTC8 594 aa5.7□□□□□ -1.5
TMEM39A-206ENST00000473684 LACRTQ9GZZ8 138 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms