RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 SPATA6Q9NWH7 488 aaPredicted RBP5.76□□□□□ -1.49
COMMD3-211ENST00000472673 NTMQ9P121 344 aa5.76□□□□□ -1.49
COMMD3-211ENST00000472673 ASH2LQ9UBL3 628 aa5.76□□□□□ -1.49
COMMD3-211ENST00000472673 PCDHA8Q9Y5H6 950 aa5.76□□□□□ -1.49
COMMD3-211ENST00000472673 OTOL1A6NHN0 477 aaPredicted RBP5.75□□□□□ -1.49
COMMD3-211ENST00000472673 NKRFO15226 690 aaKnown RBP eCLIP5.75□□□□□ -1.49
COMMD3-211ENST00000472673 GABREP78334 506 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 GUCY1A3Q02108 690 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 GRIN1Q05586 938 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 PAK1Q13153 545 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 BMS1Q14692 1282 aaKnown RBP5.75□□□□□ -1.49
COMMD3-211ENST00000472673 TEPPQ6URK8 271 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 TRIM48Q8IWZ4 208 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 RBM12BQ8IXT5 1001 aaKnown RBP5.75□□□□□ -1.49
COMMD3-211ENST00000472673 CARFQ8N187 725 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 DRC1Q96MC2 740 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 XYLT2Q9H1B5 865 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 RAPGEFL1Q9UHV5 662 aa5.75□□□□□ -1.49
COMMD3-211ENST00000472673 LRG1P02750 347 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 THBS2P35442 1172 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 SARSP49591 514 aaKnown RBP5.74□□□□□ -1.49
COMMD3-211ENST00000472673 TUSC3Q13454 348 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 ZC3H12BQ5HYM0 836 aaKnown RBP5.74□□□□□ -1.49
COMMD3-211ENST00000472673 TTLL6Q8N841 843 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 ZSWIM2Q8NEG5 633 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 UHMK1Q8TAS1 419 aaKnown RBP5.74□□□□□ -1.49
COMMD3-211ENST00000472673 THAP3Q8WTV1 239 aaPredicted RBP5.74□□□□□ -1.49
COMMD3-211ENST00000472673 KISS1RQ969F8 398 aaPredicted RBP5.74□□□□□ -1.49
COMMD3-211ENST00000472673 DSEQ9UL01 958 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 CDK11AQ9UQ88 783 aaPredicted RBP5.74□□□□□ -1.49
COMMD3-211ENST00000472673 NUB1Q9Y5A7 615 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 PCDHA9Q9Y5H5 950 aa5.74□□□□□ -1.49
COMMD3-211ENST00000472673 A0A0G2JLL6 359 aaPredicted RBP5.73□□□□□ -1.49
COMMD3-211ENST00000472673 LTFP02788 710 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 NAT1P18440 290 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 CTSWP56202 376 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 NFE2L2Q16236 605 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 HABP4Q5JVS0 413 aaKnown RBP5.73□□□□□ -1.49
COMMD3-211ENST00000472673 NT5DC1Q5TFE4 455 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 LILRA6Q6PI73 481 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 LILRB2Q8N423 598 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 TTLL11Q8NHH1 800 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 CLEC4DQ8WXI8 215 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 C20orf173Q96LM9 149 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 ZSWIM3Q96MP5 696 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 NDOR1Q9UHB4 597 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 PTCH2Q9Y6C5 1203 aa5.73□□□□□ -1.49
COMMD3-211ENST00000472673 CRTAMO95727 393 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 SRGAP2CP0DJJ0 459 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 RPL13P26373 211 aaKnown RBP5.72□□□□□ -1.49
COMMD3-211ENST00000472673 ADAM9Q13443 819 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 C2orf27AQ580R0 203 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 TMC5Q6UXY8 1006 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
COMMD3-211ENST00000472673 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 PCDH19Q8TAB3 1148 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 UBXN4Q92575 508 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 MRFAP1L1Q96HT8 127 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 CD244Q9BZW8 370 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 ADAM7Q9H2U9 754 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 ZSWIM4Q9H7M6 989 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 SLC52A2Q9HAB3 445 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 CATSPERZQ9NTU4 200 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 USP40Q9NVE5 1235 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 RBPJLQ9UBG7 517 aa5.72□□□□□ -1.49
COMMD3-211ENST00000472673 ARVCFO00192 962 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 ST5P78524 1137 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 PAN2Q504Q3 1202 aaKnown RBP5.71□□□□□ -1.5
COMMD3-211ENST00000472673 KCTD1Q719H9 257 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 ZNF761Q86XN6 746 aaPredicted RBP5.71□□□□□ -1.5
COMMD3-211ENST00000472673 ZC3H7AQ8IWR0 971 aaKnown RBP5.71□□□□□ -1.5
COMMD3-211ENST00000472673 FBXW5Q969U6 566 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 CLIC6Q96NY7 704 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 LNPKQ9C0E8 428 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 CROTQ9UKG9 612 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 WASF3Q9UPY6 502 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 TELO2Q9Y4R8 837 aa5.71□□□□□ -1.5
COMMD3-211ENST00000472673 TCRBV5S4A2TA0A5A2 114 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 DDX3XO00571 662 aaKnown RBP eCLIP5.7□□□□□ -1.5
COMMD3-211ENST00000472673 WNT9AO14904 365 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 EFCAB14O75071 495 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 APPP05067 770 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 PYGMP11217 842 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 PDE6AP16499 860 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 FAHP16930 419 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 GJA9P57773 515 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 NFIXQ14938 502 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 CCDC144BQ3MJ40 725 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 PRAMEF18Q5VWM3 479 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 VASNQ6EMK4 673 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 ARHGAP36Q6ZRI8 547 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 SLC7A14Q8TBB6 771 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 ADAMTS17Q8TE56 1095 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 SH3RF2Q8TEC5 729 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 TMEM209Q96SK2 561 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 RTEL1Q9NZ71 1219 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 SFMBT1Q9UHJ3 866 aa5.7□□□□□ -1.5
COMMD3-211ENST00000472673 CCDC163A0A0D9SF12 145 aa5.69□□□□□ -1.5
COMMD3-211ENST00000472673 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms