RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PSME4Q14997 1843 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 FOCADQ5VW36 1801 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 TCP10L2B9ZVM9 353 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 H7C1D1 291 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 WNT10BO00744 389 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 PARP1P09874 1014 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 AKR1B1P15121 316 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 LMNB1P20700 586 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 ALAS2P22557 587 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 CACNB3P54284 484 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 UBE2HP62256 183 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 GNL2Q13823 731 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 TNFAIP1Q13829 316 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 FOXD4L6Q3SYB3 417 aaPredicted RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 FOXD4L3Q6VB84 417 aaPredicted RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 TMEM179Q6ZVK1 233 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 SND1Q7KZF4 910 aaKnown RBP eCLIP7□□□□□ -1.29
SMNDC1-204ENST00000471297 FERMT3Q86UX7 667 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 GJD3Q8N144 294 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 SVOPQ8N4V2 548 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 SRBD1Q8N5C6 995 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 MKL1Q969V6 931 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 SYAP1Q96A49 352 aaPredicted RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 SYT17Q9BSW7 474 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 CABP5Q9NP86 173 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 SH3GLB2Q9NR46 395 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 ABI2Q9NYB9 513 aaPredicted RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 MAD2L2Q9UI95 211 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 CNOT7Q9UIV1 285 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 DCTN4Q9UJW0 460 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 SYNPO2Q9UMS6 1093 aa7□□□□□ -1.29
SMNDC1-204ENST00000471297 DDX60LQ5H9U9 1706 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 BRCA1P38398 1863 aaKnown RBP7□□□□□ -1.29
SMNDC1-204ENST00000471297 MYH1P12882 1939 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 CDK5RAP2Q96SN8 1893 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ELOA3CA0A087WX78 387 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 CLRN2A0PK11 232 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ELOA3DA6NLF2 546 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ZBTB42B2RXF5 422 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 PLEKHA8P1O95397 391 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 MMP1P03956 469 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 PSAPP07602 524 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 EPXP11678 715 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 U2AF2P26368 475 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 MAPK1P28482 360 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 GMPSP49915 693 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 GUCY1B3Q02153 619 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 KIF23Q02241 960 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 MAP3K10Q02779 954 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 TBC1D8BQ0IIM8 1120 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 PKN1Q16512 942 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 PFKFB3Q16875 520 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ABCB5Q2M3G0 1257 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ELOA3BQ3SY89 546 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ASPRV1Q53RT3 343 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 SLCO4C1Q6ZQN7 724 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ELOA3Q8NG57 546 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 LEO1Q8WVC0 666 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 BTBD6Q96KE9 485 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 SPATA32Q96LK8 384 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 CSRNP1Q96S65 589 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 SPZ1Q9BXG8 430 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 FOXP1Q9H334 677 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 DNAJC18Q9H819 358 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 VEZTQ9HBM0 779 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 BRMS1Q9HCU9 246 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 CLIP2Q9UDT6 1046 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 RCOR1Q9UKL0 485 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 CNTNAP5Q8WYK1 1306 aa6.99□□□□□ -1.29
SMNDC1-204ENST00000471297 GOLGA6L4A6NEF3 574 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 KLRF2D3W0D1 207 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 FIBPO43427 364 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 LETM1O95202 739 aaPredicted RBP6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 YEATS4O95619 227 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 SNHG28P0DPA3 235 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 SCG2P13521 617 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 CALML3P27482 149 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 GUCY1A2P33402 732 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 KRT2P35908 639 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 PRELPP51888 382 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 MARSP56192 900 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 PCSK7Q16549 785 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 KIF4BQ2VIQ3 1234 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 GPATCH4Q5T3I0 446 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 OTUD7BQ6GQQ9 843 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 GALNT17Q6IS24 598 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 GPC2Q8N158 579 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 RRP36Q96EU6 259 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 AIFM3Q96NN9 605 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 MDFIQ99750 246 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 PHF20Q9BVI0 1012 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 RBCK1Q9BYM8 510 aa6.98□□□□□ -1.29
SMNDC1-204ENST00000471297 RIOX1Q9H6W3 641 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms