RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SERINC5Q86VE9 423 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 MYOCDQ8IZQ8 938 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 TGS1Q96RS0 853 aaKnown RBP14.21□□□□□ -0.13
HDAC3-204ENST00000469207 MYL10Q9BUA6 226 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 CD320Q9NPF0 282 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 SETD4Q9NVD3 440 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 COG5Q9UP83 839 aa14.21□□□□□ -0.13
HDAC3-204ENST00000469207 BDP1A6H8Y1 2624 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 UPP2O95045 317 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 PARNO95453 639 aaKnown RBP14.2□□□□□ -0.14
HDAC3-204ENST00000469207 CTSHP09668 335 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 TGFB3P10600 412 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 SP4Q02446 784 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
HDAC3-204ENST00000469207 WTAPQ15007 396 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 USP17L6PQ6QN14 398 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 TRIM50Q86XT4 487 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 CMTR1Q8N1G2 835 aaKnown RBP14.2□□□□□ -0.14
HDAC3-204ENST00000469207 IGDCC4Q8TDY8 1250 aa14.2□□□□□ -0.14
HDAC3-204ENST00000469207 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
HDAC3-204ENST00000469207 NCOR1O75376 2440 aa14.19□□□□□ -0.14
HDAC3-204ENST00000469207 SPATA31C2B4DYI2 1134 aa14.19□□□□□ -0.14
HDAC3-204ENST00000469207 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-204ENST00000469207 PLEKHG4Q58EX7 1191 aa14.19□□□□□ -0.14
HDAC3-204ENST00000469207 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
HDAC3-204ENST00000469207 SAMD3Q8N6K7 520 aa14.19□□□□□ -0.14
HDAC3-204ENST00000469207 COL4A4P53420 1690 aaPredicted RBP14.19□□□□□ -0.14
HDAC3-204ENST00000469207 DOCK5Q9H7D0 1870 aa14.18□□□□□ -0.14
HDAC3-204ENST00000469207 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.18□□□□□ -0.14
HDAC3-204ENST00000469207 ERICH2A1L162 156 aa14.18□□□□□ -0.14
HDAC3-204ENST00000469207 HOXC8P31273 242 aa14.18□□□□□ -0.14
HDAC3-204ENST00000469207 RALYLQ86SE5 291 aaKnown RBP14.18□□□□□ -0.14
HDAC3-204ENST00000469207 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
HDAC3-204ENST00000469207 INPP4AQ96PE3 977 aaPredicted RBP14.18□□□□□ -0.14
HDAC3-204ENST00000469207 GPR20Q99678 358 aa14.18□□□□□ -0.14
HDAC3-204ENST00000469207 INSL6Q9Y581 213 aa14.18□□□□□ -0.14
HDAC3-204ENST00000469207 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-204ENST00000469207 hCG_1642624A0A1W2PR95 340 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 NOP56O00567 594 aaKnown RBP14.17□□□□□ -0.14
HDAC3-204ENST00000469207 MEIS2O14770 477 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 SGSM2O43147 1006 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 ATP9AO75110 1047 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 AMHP03971 560 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 RXRAP19793 462 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 ICAM3P32942 547 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 HTRA4P83105 476 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-204ENST00000469207 CATIPQ7Z7H3 387 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 RAB11FIP4Q86YS3 637 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 MB21D2Q8IYB1 491 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-204ENST00000469207 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.17□□□□□ -0.14
HDAC3-204ENST00000469207 LRFN3Q9BTN0 628 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 LMCD1Q9NZU5 365 aa14.17□□□□□ -0.14
HDAC3-204ENST00000469207 EMSYQ7Z589 1322 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 EFCAB14O75071 495 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 KCNA5P22460 613 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 NEDD9Q14511 834 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 EPC2Q52LR7 807 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 METTL7BQ6UX53 244 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 SRBD1Q8N5C6 995 aaKnown RBP14.16□□□□□ -0.14
HDAC3-204ENST00000469207 SMARCC2Q8TAQ2 1214 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 SEPT8Q92599 483 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 TOP1MTQ969P6 601 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 UBE2ZQ9H832 354 aaPredicted RBP14.16□□□□□ -0.14
HDAC3-204ENST00000469207 LY9Q9HBG7 655 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 PKD2L1Q9P0L9 805 aa14.16□□□□□ -0.14
HDAC3-204ENST00000469207 FAM86C2PA6NEL3 165 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 FIBPO43427 364 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 CHRNA1P02708 482 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 IL9P15248 144 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 ADAM17P78536 824 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 ARHGAP4P98171 946 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 GNPTABQ3T906 1256 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 RUFY4Q6ZNE9 571 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 ZNF654Q8IZM8 581 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 CCDC82Q8N4S0 544 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
HDAC3-204ENST00000469207 RUFY2Q8WXA3 655 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 ZBTB10Q96DT7 871 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 C11orf16Q9NQ32 467 aa14.15□□□□□ -0.14
HDAC3-204ENST00000469207 RBM8AQ9Y5S9 174 aaKnown RBP14.15□□□□□ -0.14
HDAC3-204ENST00000469207 FRMPD4Q14CM0 1322 aa14.15□□□□□ -0.15
HDAC3-204ENST00000469207 MICAL3Q7RTP6 2002 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 SIP14410 1827 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 MARK3P27448 753 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 TRAF1Q13077 416 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 GPM6BQ13491 265 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 SART3Q15020 963 aaKnown RBP14.14□□□□□ -0.15
HDAC3-204ENST00000469207 PCNX4Q63HM2 1172 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 LMBR1Q8WVP7 490 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 RRP36Q96EU6 259 aaKnown RBP14.14□□□□□ -0.15
HDAC3-204ENST00000469207 YME1L1Q96TA2 773 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 LRRC2Q9BYS8 371 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 BRWD1Q9NSI6 2320 aa14.14□□□□□ -0.15
HDAC3-204ENST00000469207 GSTTP1A0A1W2PQM5 241 aa14.13□□□□□ -0.15
HDAC3-204ENST00000469207 H3BQ06 376 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms