RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 NEDD9Q14511 834 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 METTL7BQ6UX53 244 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 IL27Q8NEV9 243 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 PPTC7Q8NI37 304 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 KAT2BQ92831 832 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 GJA10Q969M2 543 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 MTG1Q9BT17 334 aaPredicted RBP18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 POLR3EQ9NVU0 708 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 ELP1O95163 1332 aa18.96■□□□□ 0.63
HLA-DPA1-245ENST00000463066 H0YGN5 161 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 DDX39AO00148 427 aaKnown RBP18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PQBP1O60828 265 aaKnown RBP18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SYN1P17600 705 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 GJB2P29033 226 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CUL4AQ13619 759 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 BRDTQ58F21 947 aaPredicted RBP18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TRIM50Q86XT4 487 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CDHR1Q96JP9 859 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 GPR20Q99678 358 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SENP7Q9BQF6 1050 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 FOXD4L1Q9NU39 408 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PDE4DIPQ5VU43 2346 aa18.95■□□□□ 0.62
HLA-DPA1-245ENST00000463066 MKI67P46013 3256 aaKnown RBP18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 A0A0U1RQG5 324 aaPredicted RBP18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 ARVCFO00192 962 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 WNT7AO00755 349 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 HOXD8P13378 290 aaPredicted RBP18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CDK7P50613 346 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 ITGA7Q13683 1181 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 DGKDQ16760 1214 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 NBPF20Q3BBV1 942 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 UTP14CQ5TAP6 766 aaKnown RBP18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 NIPA1Q7RTP0 329 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 FBXO18Q8NFZ0 1043 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 MYH7BA7E2Y1 1941 aa18.94■□□□□ 0.62
HLA-DPA1-245ENST00000463066 DOCK5Q9H7D0 1870 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 GSTTP1A0A1W2PQM5 241 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 KIF28PB7ZC32 967 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 NOP56O00567 594 aaKnown RBP18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 DHX15O43143 795 aaKnown RBP18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CABYRO75952 493 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CCNE2O96020 404 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 USP11P51784 963 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 LETM2Q2VYF4 491 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SH3RF1Q7Z6J0 888 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SLC43A3Q8NBI5 491 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 C16orf70Q9BSU1 422 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 BRMS1Q9HCU9 246 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SMC3Q9UQE7 1217 aa18.93■□□□□ 0.62
HLA-DPA1-245ENST00000463066 MSH4O15457 936 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 MAFGO15525 162 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SLC37A4O43826 429 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 KPNA6O60684 536 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 LGALS2P05162 132 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PSEN2P49810 448 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 C1orf53Q5VUE5 145 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 NEK8Q86SG6 692 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 MBOAT7Q96N66 472 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 ZNF577Q9BSK1 485 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TRPV6Q9H1D0 765 aa18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 JPH1Q9HDC5 661 aaPredicted RBP18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TNRC18O15417 2968 aaPredicted RBP18.92■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CYP3A7-CYP3A51PA0A087WV96 503 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 RBAK-RBAKDNI3L0D1 243 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 K7ELQ4 463 aaPredicted RBP18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 IPO5O00410 1097 aaKnown RBP18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PPFIA4O75335 1185 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 CYP3A7P24462 503 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 FAM47CQ5HY64 1035 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 FAM126BQ8IXS8 530 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SNX21Q969T3 373 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SDF4Q9BRK5 362 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PRDM5Q9NQX1 630 aaPredicted RBP18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PDLIM7Q9NR12 457 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SLC9A2Q9UBY0 812 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 NFASCO94856 1347 aa18.91■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TRIM43BA6NCK2 446 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 F2P00734 622 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 ATP2B1P20020 1258 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TCF7P36402 384 aaPredicted RBP18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 ACTR2P61160 394 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SETQ01105 290 aaPredicted RBP18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 FAAP100Q0VG06 881 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 HIC1Q14526 733 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 MFSD10Q14728 455 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 SAFBQ15424 915 aaKnown RBP eCLIP18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 Q4G0T1 1027 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 ANKRD33Q7Z3H0 272 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TRIM43Q96BQ3 446 aaPredicted RBP18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 PCYT2Q99447 389 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 TRMT13Q9NUP7 481 aaKnown RBP18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 DDX25Q9UHL0 483 aaKnown RBP18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 NR2E3Q9Y5X4 410 aa18.9■□□□□ 0.62
HLA-DPA1-245ENST00000463066 HAS3O00219 553 aa18.89■□□□□ 0.61
HLA-DPA1-245ENST00000463066 KIAA0753Q2KHM9 967 aa18.89■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SEPT1Q8WYJ6 367 aa18.89■□□□□ 0.61
HLA-DPA1-245ENST00000463066 SLC5A5Q92911 643 aa18.89■□□□□ 0.61
HLA-DPA1-245ENST00000463066 HDAC6Q9UBN7 1215 aa18.89■□□□□ 0.61
HLA-DPA1-245ENST00000463066 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms