RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 COG5Q9UP83 839 aa9.21□□□□□ -0.94
CDC42BPA-210ENST00000462553 USP34Q70CQ2 3546 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 LINC01553A4QN01 128 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 KIF28PB7ZC32 967 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 NR3C2P08235 984 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 CASTP20810 708 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 HOXC8P31273 242 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 NUBP1P53384 320 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 ZNF200P98182 395 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 PTK7Q13308 1070 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 DGKDQ16760 1214 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 KIAA0753Q2KHM9 967 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 ZNF618Q5T7W0 954 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 FBXO11Q86XK2 927 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 MCF2L2Q86YR7 1114 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 PDCD2LQ9BRP1 358 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 ALG1Q9BT22 464 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 EPHX3Q9H6B9 360 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 KAT14Q9H8E8 782 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 SUGCTQ9HAC7 445 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 TTC3P53804 2025 aa9.2□□□□□ -0.94
CDC42BPA-210ENST00000462553 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 CFBP00751 764 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 PARP1P09874 1014 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 UBA1P22314 1058 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 ERVK-21P61565 698 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 HSDL1Q3SXM5 330 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 CCDC178Q5BJE1 867 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 IFIT1BQ5T764 474 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 ARHGEF16Q5VV41 709 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 MYSM1Q5VVJ2 828 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 C7orf31Q8N865 590 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 NCOA7Q8NI08 942 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 GPKOWQ92917 476 aaPredicted RBP eCLIP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 HLA-CQ95604 372 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 RAD9AQ99638 391 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 UBAC1Q9BSL1 405 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 LRFN3Q9BTN0 628 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 KATNAL1Q9BW62 490 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 C1QTNF1Q9BXJ1 281 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 CD320Q9NPF0 282 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 LMCD1Q9NZU5 365 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 MTUS1Q9ULD2 1270 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 MRPL11Q9Y3B7 192 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 MRVI1Q9Y6F6 885 aa9.19□□□□□ -0.94
CDC42BPA-210ENST00000462553 ABHD14A-ACY1A0A1B0GW23 586 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 SNPHO15079 494 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 SORBS3O60504 671 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 HOXA13P31271 388 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 SP2Q02086 613 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 TRDNQ13061 729 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 LAMC2Q13753 1193 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 FRMPD4Q14CM0 1322 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 PGM5Q15124 567 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 WDR81Q562E7 1941 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 CELF3Q5SZQ8 465 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 RALYLQ86SE5 291 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 SERINC5Q86VE9 423 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 IGDCC4Q8TDY8 1250 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 KCNB2Q92953 911 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 FAM212AQ96EL1 285 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 TGS1Q96RS0 853 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 C16orf70Q9BSU1 422 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 AMNQ9BXJ7 453 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 OSBPL7Q9BZF2 842 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 BCAS3Q9H6U6 928 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 VAT1LQ9HCJ6 419 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 MAD2L2Q9UI95 211 aa9.18□□□□□ -0.94
CDC42BPA-210ENST00000462553 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 PALM3A6NDB9 673 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 SH2B2O14492 632 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 IFIT3O14879 490 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 ZBTB5O15062 677 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 DHX16O60231 1041 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 EFCAB14O75071 495 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 LGR5O75473 907 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 GGPS1O95749 300 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 MYCLP12524 364 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 TROAPQ12815 778 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 SEMA3FQ13275 785 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 GRM4Q14833 912 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 WTAPQ15007 396 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 TSGA10IPQ3SY00 556 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 FAM117BQ6P1L5 589 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 VSIG10LQ86VR7 867 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 FAM122AQ96E09 287 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 UBE2ZQ9H832 354 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 TELO2Q9Y4R8 837 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 PLXNA4Q9HCM2 1894 aa9.17□□□□□ -0.94
CDC42BPA-210ENST00000462553 CFAP54Q96N23 3096 aa9.16□□□□□ -0.94
CDC42BPA-210ENST00000462553 TECTAO75443 2155 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms