RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 YTHDC1Q96MU7 727 aaKnown RBP7.33□□□□□ -1.24
DDX1-204ENST00000459706 DUSP15Q9H1R2 295 aaPredicted RBP7.33□□□□□ -1.24
DDX1-204ENST00000459706 TRIM39Q9HCM9 518 aa7.33□□□□□ -1.24
DDX1-204ENST00000459706 BACE2Q9Y5Z0 518 aa7.33□□□□□ -1.24
DDX1-204ENST00000459706 COL16A1Q07092 1604 aaPredicted RBP7.33□□□□□ -1.24
DDX1-204ENST00000459706 RGPD1P0DJD0 1748 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 MAP3K19Q56UN5 1328 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 ZBED9Q6R2W3 1325 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 H0Y8X5 98 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 PDE8AO60658 829 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 VAMP4O75379 141 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 GCP02774 474 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 H2AFB1P0C5Y9 115 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 H2AFB2P0C5Z0 115 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 CNGA1P29973 690 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 OXCT1P55809 520 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 NFIAQ12857 509 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 RNF111Q6ZNA4 994 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 ARHGAP27Q6ZUM4 889 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 TSPYL5Q86VY4 417 aaPredicted RBP7.32□□□□□ -1.24
DDX1-204ENST00000459706 KREMEN2Q8NCW0 462 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 TCTN2Q96GX1 697 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 MCM8Q9UJA3 840 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 ATP8A1Q9Y2Q0 1164 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 GPR55Q9Y2T6 319 aaPredicted RBP7.32□□□□□ -1.24
DDX1-204ENST00000459706 NPFFR2Q9Y5X5 522 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 CPDO75976 1380 aa7.32□□□□□ -1.24
DDX1-204ENST00000459706 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 C2orf71A6NGG8 1288 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 ALG1L2C9J202 215 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 IRS4O14654 1257 aaPredicted RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 U2AF1L5P0DN76 240 aaPredicted RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 VAV1P15498 845 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 PCBP3P57721 371 aaKnown RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 U2AF1Q01081 240 aaKnown RBP eCLIP7.31□□□□□ -1.24
DDX1-204ENST00000459706 RRS1Q15050 365 aaKnown RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 UBE2R2Q712K3 238 aaPredicted RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 DDX46Q7L014 1031 aaKnown RBP7.31□□□□□ -1.24
DDX1-204ENST00000459706 ZNF765Q7L2R6 523 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 TMPRSS7Q7RTY8 843 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 RNF180Q86T96 592 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 SLC7A14Q8TBB6 771 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 LGR4Q9BXB1 951 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 SLC52A2Q9HAB3 445 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 GPR27Q9NS67 375 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 STK17AQ9UEE5 414 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 NDOR1Q9UHB4 597 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 CAMTA1Q9Y6Y1 1673 aa7.31□□□□□ -1.24
DDX1-204ENST00000459706 MAPK8IP3Q9UPT6 1336 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 RAB11FIP3O75154 756 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 ZNF205O95201 554 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 F13BP05160 661 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 HOXC9P31274 260 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 IGFALSP35858 605 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 ECI1P42126 302 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 CTSKP43235 329 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 SEPHS1P49903 392 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 SCRN1Q12765 414 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 KCNMA1Q12791 1236 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 KCNAB2Q13303 367 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 WWC2Q6AWC2 1192 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 ARHGEF25Q86VW2 580 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 KIF18BQ86Y91 864 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 KSR1Q8IVT5 923 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 RPUSD2Q8IZ73 545 aaKnown RBP7.3□□□□□ -1.24
DDX1-204ENST00000459706 IFNL3Q8IZI9 196 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 NPLOC4Q8TAT6 608 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 IP6K1Q92551 441 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 RUNDC1Q96C34 613 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 MFSD14AQ96MC6 490 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 FCRL3Q96P31 734 aaPredicted RBP7.3□□□□□ -1.24
DDX1-204ENST00000459706 MMP19Q99542 508 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 ORAI3Q9BRQ5 295 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 OSBPL1AQ9BXW6 950 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 DDX56Q9NY93 547 aaKnown RBP7.3□□□□□ -1.24
DDX1-204ENST00000459706 COL14A1Q05707 1796 aaKnown RBP7.3□□□□□ -1.24
DDX1-204ENST00000459706 PLEKHG2Q9H7P9 1386 aa7.3□□□□□ -1.24
DDX1-204ENST00000459706 LMO7Q8WWI1 1683 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 COL18A1P39060 1754 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 RGPD5Q99666 1765 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 TMEM265A0A087WTH1 108 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 SSU72P8A0A1W2PR75 194 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 FAM170BA6NMN3 283 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 PRR33A8MZF0 331 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 MEFVO15553 781 aaPredicted RBP7.29□□□□□ -1.24
DDX1-204ENST00000459706 DNAJC8O75937 253 aaPredicted RBP7.29□□□□□ -1.24
DDX1-204ENST00000459706 IGLV1-40P01703 118 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 CD3EP07766 207 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 SDSP20132 328 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 IL13P35225 146 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 LTBRP36941 435 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 NFKB2Q00653 900 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 DHCR24Q15392 516 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 SF1Q15637 639 aaKnown RBP7.29□□□□□ -1.24
DDX1-204ENST00000459706 NTRK3Q16288 839 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 NKPD1Q17RQ9 610 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 DPY19L1Q2PZI1 675 aa7.29□□□□□ -1.24
DDX1-204ENST00000459706 USP53Q70EK8 1073 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms